| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2845 |
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| Symbol | |
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| ID | 4174605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3449524 |
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| End bp | 3450387 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638055861 |
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| Product | formate dehydrogenase, subunit FdhD |
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| Protein accession | YP_662409 |
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| Protein GI | 109899154 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCATTG ACGATATCAT CGCCAGTGAA GAGCCTCTGG AAATTTGGTT GAAGCACCCT
CTCAAACAGG GCGGTAACGC CAGTTTATTG TTGACCACTA TGCGCAGCCC AGGGGACGAT
ACCGCATTGG TGAGGGGGTG GCTGCACACT AGCGGATTGT TAGCAAATAG CGCAGATATT
CAAAGCGTTA CTCATACCGG TAGTGAGCGA ATAAAAGGTA ACGAGGCAAA TCAGATACTC
GTGACTTTAC ACCCACAATC TGACTTCGAC GTTACCTCAG CGCAAAGCCA AGGGGGAAGT
CACATCGAGT ACGTTAATTC AGGCTGCGGT GTGTGTGGCC AACGCTCTAT TGATGTATTG
CTTGATAAAA TTCCCCATCG AGATACGCCC AATAACGCTT CGCTGTTTTC GCTGTTAACT
AAAGAGGTTT TATCTTTAGC CGATGCACTT CGCCAACAGC AAACTGCGTT TGCTGCAACG
GGAGGCAGTC ACGGGGCTGG GCTGTTTGTA CTACCAGAGC ATGCTAATCT GAATGCTCCG
CAAACAGGGG CAAATAGGCT TATCGATGTA CGTGAAGACA TTGGTCGCCA TAATGCCCTC
GATAAACTGA TTGGTGCCAA TTTACCCATG CTTCTAGTGG GTAATTCCCC GGAAAAACCG
AAGGAGTACG GGGTCGTCAT AAGCTCGCGG ATCAGTTTCG ACTTGGTACA AAAAGCCGCC
ATGGCAAATA TCGGTATGAT CCTAGCCATG GGGGCACCGT CCACGTTGGC TATCGAGCTG
GCCAACGAAT GCGATATTTG CTTAGTGGGC TTTATTAGCC AAAAACGTAT CAACGTATAT
ACCTGCGACC ACAGAATTGT ATAG
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| Protein sequence | MAIDDIIASE EPLEIWLKHP LKQGGNASLL LTTMRSPGDD TALVRGWLHT SGLLANSADI
QSVTHTGSER IKGNEANQIL VTLHPQSDFD VTSAQSQGGS HIEYVNSGCG VCGQRSIDVL
LDKIPHRDTP NNASLFSLLT KEVLSLADAL RQQQTAFAAT GGSHGAGLFV LPEHANLNAP
QTGANRLIDV REDIGRHNAL DKLIGANLPM LLVGNSPEKP KEYGVVISSR ISFDLVQKAA
MANIGMILAM GAPSTLAIEL ANECDICLVG FISQKRINVY TCDHRIV
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