More than 300 homologs were found in PanDaTox collection
for query gene Tpau_2346 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_2346  formate dehydrogenase family accessory protein FdhD  100 
 
 
284 aa  565  1e-160  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.36394  n/a   
 
 
-
 
NC_013169  Ksed_15020  formate dehydrogenase family accessory protein FdhD  68.84 
 
 
281 aa  354  7.999999999999999e-97  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.503102  normal 
 
 
-
 
NC_013441  Gbro_3682  formate dehydrogenase subunit FdhD  64.64 
 
 
279 aa  347  1e-94  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4114  formate dehydrogenase family accessory protein FdhD  63.41 
 
 
293 aa  342  2.9999999999999997e-93  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1157  formate dehydrogenase family accessory protein FdhD  63.77 
 
 
274 aa  330  2e-89  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3572  formate dehydrogenase accessory protein  62.91 
 
 
274 aa  328  6e-89  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3577  formate dehydrogenase accessory protein  62.91 
 
 
274 aa  328  6e-89  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3645  formate dehydrogenase accessory protein  62.91 
 
 
274 aa  328  6e-89  Mycobacterium sp. KMS  Bacteria  normal  normal  0.259742 
 
 
-
 
NC_013510  Tcur_3534  formate dehydrogenase family accessory protein FdhD  62.46 
 
 
284 aa  325  4.0000000000000003e-88  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4033  formate dehydrogenase accessory protein  59.58 
 
 
287 aa  318  6e-86  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.681532  normal  0.294632 
 
 
-
 
NC_009338  Mflv_2593  formate dehydrogenase accessory protein  63.95 
 
 
278 aa  318  7e-86  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4473  formate dehydrogenase family accessory protein FdhD  62.95 
 
 
276 aa  313  1.9999999999999998e-84  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.979472  n/a   
 
 
-
 
NC_013159  Svir_12240  formate dehydrogenase family accessory protein FdhD  61.48 
 
 
272 aa  313  2.9999999999999996e-84  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12913  formate dehydrogenase accessory protein  58.87 
 
 
276 aa  305  5.0000000000000004e-82  Mycobacterium tuberculosis F11  Bacteria  normal  0.167876  normal 
 
 
-
 
NC_007333  Tfu_1624  formate dehydrogenase accessory protein  58.78 
 
 
275 aa  292  4e-78  Thermobifida fusca YX  Bacteria  normal  0.199677  n/a   
 
 
-
 
NC_008541  Arth_0802  formate dehydrogenase family accessory protein FdhD  54.83 
 
 
309 aa  286  2.9999999999999996e-76  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0919  formate dehydrogenase family accessory protein FdhD  55.97 
 
 
292 aa  285  4e-76  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009921  Franean1_2306  formate dehydrogenase accessory protein  57.49 
 
 
286 aa  285  5.999999999999999e-76  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2115  formate dehydrogenase family accessory protein FdhD  59.14 
 
 
273 aa  278  6e-74  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3467  formate dehydrogenase family accessory protein FdhD  55 
 
 
294 aa  270  2e-71  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009664  Krad_3339  formate dehydrogenase family accessory protein FdhD  54.35 
 
 
297 aa  267  1e-70  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.224084 
 
 
-
 
NC_013131  Caci_0829  formate dehydrogenase family accessory protein FdhD  52.2 
 
 
296 aa  268  1e-70  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.00158751 
 
 
-
 
NC_013947  Snas_0300  formate dehydrogenase family accessory protein FdhD  53.41 
 
 
268 aa  254  1.0000000000000001e-66  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0145  formate dehydrogenase family accessory protein FdhD  53.67 
 
 
289 aa  253  2.0000000000000002e-66  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0667  formate dehydrogenase, subunit FdhD  47.2 
 
 
320 aa  253  2.0000000000000002e-66  Acidothermus cellulolyticus 11B  Bacteria  normal  0.187577  normal 
 
 
-
 
NC_014212  Mesil_2130  formate dehydrogenase family accessory protein FdhD  50.36 
 
 
283 aa  252  4.0000000000000004e-66  Meiothermus silvanus DSM 9946  Bacteria  normal  0.455912  normal  0.581272 
 
 
-
 
NC_013172  Bfae_29960  formate dehydrogenase family accessory protein FdhD  51.55 
 
 
290 aa  253  4.0000000000000004e-66  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1914  formate dehydrogenase family accessory protein FdhD  50 
 
 
285 aa  251  9.000000000000001e-66  Meiothermus ruber DSM 1279  Bacteria  normal  0.84446  hitchhiker  0.0000450272 
 
 
-
 
NC_013037  Dfer_2665  formate dehydrogenase family accessory protein FdhD  50.38 
 
 
275 aa  248  9e-65  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1325  formate dehydrogenase  50.91 
 
 
282 aa  242  3.9999999999999997e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.201918 
 
 
-
 
NC_011726  PCC8801_0758  formate dehydrogenase family accessory protein FdhD  47.17 
 
 
299 aa  242  3.9999999999999997e-63  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0784  formate dehydrogenase family accessory protein FdhD  46.79 
 
 
299 aa  240  2e-62  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_0406  formate dehydrogenase family accessory protein FdhD  48.03 
 
 
284 aa  232  5e-60  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4385  formate dehydrogenase family accessory protein FdhD  49.65 
 
 
288 aa  232  6e-60  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1855  formate dehydrogenase family accessory protein FdhD  49.45 
 
 
275 aa  226  4e-58  Nakamurella multipartita DSM 44233  Bacteria  normal  0.121584  normal  0.0332237 
 
 
-
 
NC_009523  RoseRS_4019  formate dehydrogenase family accessory protein FdhD  47.12 
 
 
288 aa  221  9.999999999999999e-57  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3157  formate dehydrogenase family accessory protein FdhD  46.01 
 
 
281 aa  219  3.9999999999999997e-56  Spirosoma linguale DSM 74  Bacteria  normal  0.630603  normal 
 
 
-
 
CP001800  Ssol_0639  formate dehydrogenase family accessory protein FdhD  44.78 
 
 
255 aa  206  4e-52  Sulfolobus solfataricus 98/2  Archaea  normal  0.444789  n/a   
 
 
-
 
NC_009440  Msed_1320  formate dehydrogenase family accessory protein FdhD  45.35 
 
 
254 aa  203  2e-51  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_013739  Cwoe_5379  formate dehydrogenase family accessory protein FdhD  50.59 
 
 
248 aa  202  4e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.0597745  normal 
 
 
-
 
NC_013132  Cpin_4073  formate dehydrogenase family accessory protein FdhD  42.59 
 
 
280 aa  201  1.9999999999999998e-50  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.110434  normal  0.0860258 
 
 
-
 
NC_013440  Hoch_0065  formate dehydrogenase family accessory protein FdhD  43.31 
 
 
277 aa  199  3.9999999999999996e-50  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.255284 
 
 
-
 
NC_011831  Cagg_1335  formate dehydrogenase family accessory protein FdhD  43.82 
 
 
289 aa  195  6e-49  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000543766 
 
 
-
 
NC_011145  AnaeK_0873  formate dehydrogenase family accessory protein FdhD  49.06 
 
 
288 aa  192  6e-48  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0877  formate dehydrogenase family accessory protein FdhD  48.69 
 
 
288 aa  191  1e-47  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2744  formate dehydrogenase family accessory protein FdhD  45.99 
 
 
251 aa  187  1e-46  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3047  formate dehydrogenase family accessory protein FdhD  45.15 
 
 
294 aa  174  9.999999999999999e-43  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_0826  formate dehydrogenase family accessory protein FdhD  48.69 
 
 
288 aa  174  1.9999999999999998e-42  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2698  formate dehydrogenase, subunit FdhD  45.82 
 
 
283 aa  173  2.9999999999999996e-42  Nocardioides sp. JS614  Bacteria  normal  0.0902014  n/a   
 
 
-
 
NC_010571  Oter_4145  formate dehydrogenase family accessory protein FdhD  44.91 
 
 
321 aa  169  5e-41  Opitutus terrae PB90-1  Bacteria  normal  normal  0.197477 
 
 
-
 
NC_008554  Sfum_0034  formate dehydrogenase family accessory protein FdhD  41.34 
 
 
267 aa  164  1.0000000000000001e-39  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.190286  normal  0.450468 
 
 
-
 
NC_008709  Ping_2123  formate dehydrogenase, subunit FdhD  36.9 
 
 
319 aa  159  4e-38  Psychromonas ingrahamii 37  Bacteria  normal  0.951323  hitchhiker  0.00982991 
 
 
-
 
NC_009253  Dred_2876  formate dehydrogenase family accessory protein FdhD  36.11 
 
 
262 aa  142  5e-33  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0487293  n/a   
 
 
-
 
NC_010717  PXO_00469  formate dehydrogenase accessory protein  37.94 
 
 
273 aa  137  1e-31  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_008228  Patl_2845  formate dehydrogenase, subunit FdhD  34.15 
 
 
287 aa  134  9.999999999999999e-31  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3678  formate dehydrogenase accessory protein  30.65 
 
 
265 aa  134  1.9999999999999998e-30  Bacillus cereus B4264  Bacteria  normal  0.688402  n/a   
 
 
-
 
NC_013216  Dtox_3374  formate dehydrogenase family accessory protein FdhD  36.73 
 
 
260 aa  133  3.9999999999999996e-30  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK3278  formate dehydrogenase accessory protein  29.89 
 
 
265 aa  132  5e-30  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1537  formate dehydrogenase family accessory protein FdhD  37.79 
 
 
257 aa  132  9e-30  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000559479  n/a   
 
 
-
 
NC_003909  BCE_3585  formate dehydrogenase accessory protein  29.89 
 
 
265 aa  131  1.0000000000000001e-29  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0556  formate dehydrogenase accessory protein  30.4 
 
 
268 aa  131  1.0000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0498  formate dehydrogenase accessory protein  30.4 
 
 
268 aa  131  1.0000000000000001e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0588  formate dehydrogenase accessory protein  30.4 
 
 
268 aa  131  1.0000000000000001e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3595  formate dehydrogenase accessory protein  29.89 
 
 
265 aa  131  1.0000000000000001e-29  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0644  formate dehydrogenase accessory protein  30.4 
 
 
268 aa  131  1.0000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011071  Smal_2149  formate dehydrogenase family accessory protein FdhD  38.72 
 
 
282 aa  130  2.0000000000000002e-29  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0500  formate dehydrogenase accessory protein  30.4 
 
 
268 aa  130  2.0000000000000002e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1390  formate dehydrogenase accessory protein FdhD  37.94 
 
 
306 aa  129  4.0000000000000003e-29  Methylococcus capsulatus str. Bath  Bacteria  normal  0.780868  n/a   
 
 
-
 
NC_012793  GWCH70_0466  formate dehydrogenase accessory protein  35.5 
 
 
262 aa  129  4.0000000000000003e-29  Geobacillus sp. WCH70  Bacteria  normal  0.276769  n/a   
 
 
-
 
NC_010511  M446_2355  formate dehydrogenase family accessory protein FdhD  36.69 
 
 
283 aa  129  7.000000000000001e-29  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0719  formate dehydrogenase family accessory protein FdhD  36.9 
 
 
278 aa  129  8.000000000000001e-29  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS3364  formate dehydrogenase accessory protein  29.5 
 
 
265 aa  128  1.0000000000000001e-28  Bacillus anthracis str. Sterne  Bacteria  normal  0.144836  n/a   
 
 
-
 
NC_005957  BT9727_3328  formate dehydrogenase accessory protein  29.5 
 
 
265 aa  128  1.0000000000000001e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0183588  n/a   
 
 
-
 
NC_007530  GBAA_3628  formate dehydrogenase accessory protein  29.5 
 
 
265 aa  128  1.0000000000000001e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4711  formate dehydrogenase accessory protein  30.15 
 
 
268 aa  127  2.0000000000000002e-28  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1343  formate dehydrogenase accessory protein  35.87 
 
 
263 aa  127  2.0000000000000002e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011658  BCAH187_A0715  formate dehydrogenase accessory protein  28.78 
 
 
268 aa  126  3e-28  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3578  formate dehydrogenase accessory protein  29.12 
 
 
265 aa  126  3e-28  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008786  Veis_2382  formate dehydrogenase family accessory protein FdhD  34.1 
 
 
277 aa  126  4.0000000000000003e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0626  formate dehydrogenase accessory protein  30.15 
 
 
268 aa  126  5e-28  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0654  formate dehydrogenase accessory protein  28.78 
 
 
268 aa  124  1e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0699  formate dehydrogenase accessory protein FdhD  38.25 
 
 
274 aa  123  3e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2347  formate dehydrogenase accessory protein  32.31 
 
 
265 aa  122  5e-27  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_0254  formate dehydrogenase family accessory protein FdhD  35.13 
 
 
299 aa  122  5e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0343903  n/a   
 
 
-
 
NC_009487  SaurJH9_2305  formate dehydrogenase accessory protein  32.31 
 
 
265 aa  122  5e-27  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1639  formate dehydrogenase accessory protein  31.74 
 
 
223 aa  122  6e-27  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_2060  formate dehydrogenase family accessory protein FdhD  34.06 
 
 
262 aa  122  9.999999999999999e-27  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.0000863556  n/a   
 
 
-
 
NC_012791  Vapar_3020  formate dehydrogenase family accessory protein FdhD  36.19 
 
 
278 aa  121  9.999999999999999e-27  Variovorax paradoxus S110  Bacteria  normal  0.848082  n/a   
 
 
-
 
NC_009674  Bcer98_0504  formate dehydrogenase accessory protein  28.91 
 
 
269 aa  121  9.999999999999999e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1352  formate dehydrogenase family accessory protein FdhD  33.2 
 
 
282 aa  121  1.9999999999999998e-26  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0444  formate dehydrogenase accessory protein  33.2 
 
 
287 aa  120  1.9999999999999998e-26  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4096  formate dehydrogenase family accessory protein FdhD  35.63 
 
 
274 aa  120  1.9999999999999998e-26  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_1654  formate dehydrogenase family accessory protein FdhD  33.2 
 
 
282 aa  121  1.9999999999999998e-26  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0684  formate dehydrogenase accessory protein FdhD  37.85 
 
 
274 aa  120  3e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0201  formate dehydrogenase accessory protein  37.85 
 
 
274 aa  120  3e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0863  formate dehydrogenase family accessory protein FdhD  37.85 
 
 
274 aa  120  3e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2334  formate dehydrogenase accessory protein  37.85 
 
 
274 aa  120  3e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  0.390052  n/a   
 
 
-
 
NC_009080  BMA10247_2414  formate dehydrogenase accessory protein  37.85 
 
 
274 aa  120  3e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2744  formate dehydrogenase accessory protein  37.85 
 
 
274 aa  120  3e-26  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0501  formate dehydrogenase accessory protein  27.7 
 
 
268 aa  120  3.9999999999999996e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
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