| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4096 |
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| Symbol | fdhD |
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| ID | 7388893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3450247 |
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| End bp | 3451071 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652801 |
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| Product | formate dehydrogenase family accessory protein FdhD |
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| Protein accession | YP_002550974 |
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| Protein GI | 222150017 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGAGA TGAAAACCAC CTGTCTCGTG CCGCAGGTGC AGTATCGCCA AGGGATGACC
AAGGAGGCCC ACCGGATCGT GCCGGAGGAA GTGCCCGTGG CCTTTTCCTA TGGCGGCTCT
ACCCACGCCG TGATGATGGC GACGCCCGCC GATCTCGCGG ATTTTGCGCT GGGTTTTTCG
CTGGCCGAGG GCATTATTAC CCGGCTGGAT GAGGTTCTTG CCATTGAACC GATCGAGGCG
GGAAGTGGCA TCGATGTGCA AGTGACGCTG CTGGATACGA CAGCGGACGC CCTGACGACC
CGCCGTCGTC GCATGGCGGG GCCTGTTGGC TGTGGTCTCT GCGGGATCGA GTCAATCGAA
CAGGCCAGCC GGGATGTACC GATCGTCACC GGCGGATTGA CGCTGACACC GGCGGATATC
CGTGAGGCTG TCGATGCGCT CAGCCGGGCG CAGGCGCTTA ACCGGCAAAC CCATGCGGTG
CATGGAGCTG GTTTCTTCAT TCCCGGCGAA GGACTGTTGG CGATCCGGGA AGATGTGGGA
CGTCATAATG CCCTTGATAA ATTGGTCGGT GCGGTGTTGA AGGCCGGACG CCGGGGCGAA
GATGGGGTGG TGGTCGTCAC CAGCCGGTTG TCGGTGGAGA TGGTGCAGAA GGCGGCCATG
CTGGGTGCGC CGATTCTATT GGCGATTTCT GCGCCAACCG CGCTTGCCAT CCGCACCGCG
CAGGCGGCGG GCATGACCCT GATCGGCATT GCCCGTGGCG ATGATTTTGA AGTGTTTACC
CGTCCTGACC GTATCGTATC CGGGGTTTCC GCCGATGTCG CATGA
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| Protein sequence | MPEMKTTCLV PQVQYRQGMT KEAHRIVPEE VPVAFSYGGS THAVMMATPA DLADFALGFS
LAEGIITRLD EVLAIEPIEA GSGIDVQVTL LDTTADALTT RRRRMAGPVG CGLCGIESIE
QASRDVPIVT GGLTLTPADI REAVDALSRA QALNRQTHAV HGAGFFIPGE GLLAIREDVG
RHNALDKLVG AVLKAGRRGE DGVVVVTSRL SVEMVQKAAM LGAPILLAIS APTALAIRTA
QAAGMTLIGI ARGDDFEVFT RPDRIVSGVS ADVA
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