More than 300 homologs were found in PanDaTox collection
for query gene Franean1_2306 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_2306  formate dehydrogenase accessory protein  100 
 
 
286 aa  555  1e-157  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4114  formate dehydrogenase family accessory protein FdhD  61.4 
 
 
293 aa  350  2e-95  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3534  formate dehydrogenase family accessory protein FdhD  62.82 
 
 
284 aa  337  9.999999999999999e-92  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4033  formate dehydrogenase accessory protein  61.54 
 
 
287 aa  335  5e-91  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.681532  normal  0.294632 
 
 
-
 
NC_009077  Mjls_3577  formate dehydrogenase accessory protein  63.31 
 
 
274 aa  333  3e-90  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3572  formate dehydrogenase accessory protein  63.31 
 
 
274 aa  333  3e-90  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3645  formate dehydrogenase accessory protein  63.31 
 
 
274 aa  333  3e-90  Mycobacterium sp. KMS  Bacteria  normal  normal  0.259742 
 
 
-
 
NC_009338  Mflv_2593  formate dehydrogenase accessory protein  64.45 
 
 
278 aa  329  4e-89  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1624  formate dehydrogenase accessory protein  64.59 
 
 
275 aa  327  2.0000000000000001e-88  Thermobifida fusca YX  Bacteria  normal  0.199677  n/a   
 
 
-
 
NC_013757  Gobs_4473  formate dehydrogenase family accessory protein FdhD  60.93 
 
 
276 aa  321  7e-87  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.979472  n/a   
 
 
-
 
NC_013159  Svir_12240  formate dehydrogenase family accessory protein FdhD  61.31 
 
 
272 aa  320  1.9999999999999998e-86  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1157  formate dehydrogenase family accessory protein FdhD  60.29 
 
 
274 aa  318  6e-86  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0829  formate dehydrogenase family accessory protein FdhD  55.59 
 
 
296 aa  308  5.9999999999999995e-83  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.00158751 
 
 
-
 
NC_009565  TBFG_12913  formate dehydrogenase accessory protein  58.48 
 
 
276 aa  307  1.0000000000000001e-82  Mycobacterium tuberculosis F11  Bacteria  normal  0.167876  normal 
 
 
-
 
NC_014158  Tpau_2346  formate dehydrogenase family accessory protein FdhD  57.84 
 
 
284 aa  306  2.0000000000000002e-82  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.36394  n/a   
 
 
-
 
NC_011886  Achl_0919  formate dehydrogenase family accessory protein FdhD  56.08 
 
 
292 aa  305  7e-82  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013441  Gbro_3682  formate dehydrogenase subunit FdhD  58.99 
 
 
279 aa  304  9.000000000000001e-82  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_15020  formate dehydrogenase family accessory protein FdhD  58.78 
 
 
281 aa  296  2e-79  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.503102  normal 
 
 
-
 
NC_008541  Arth_0802  formate dehydrogenase family accessory protein FdhD  55.48 
 
 
309 aa  291  6e-78  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3467  formate dehydrogenase family accessory protein FdhD  54.93 
 
 
294 aa  291  9e-78  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_0300  formate dehydrogenase family accessory protein FdhD  53.74 
 
 
268 aa  281  8.000000000000001e-75  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0667  formate dehydrogenase, subunit FdhD  52.34 
 
 
320 aa  281  8.000000000000001e-75  Acidothermus cellulolyticus 11B  Bacteria  normal  0.187577  normal 
 
 
-
 
NC_014151  Cfla_2115  formate dehydrogenase family accessory protein FdhD  54.62 
 
 
273 aa  267  2e-70  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0784  formate dehydrogenase family accessory protein FdhD  49.28 
 
 
299 aa  265  5e-70  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0758  formate dehydrogenase family accessory protein FdhD  48.92 
 
 
299 aa  264  1e-69  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_0145  formate dehydrogenase family accessory protein FdhD  54.41 
 
 
289 aa  264  1e-69  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3339  formate dehydrogenase family accessory protein FdhD  53.74 
 
 
297 aa  260  2e-68  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.224084 
 
 
-
 
NC_008312  Tery_0406  formate dehydrogenase family accessory protein FdhD  48.06 
 
 
284 aa  253  2.0000000000000002e-66  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2130  formate dehydrogenase family accessory protein FdhD  52.27 
 
 
283 aa  251  1e-65  Meiothermus silvanus DSM 9946  Bacteria  normal  0.455912  normal  0.581272 
 
 
-
 
NC_013946  Mrub_1914  formate dehydrogenase family accessory protein FdhD  47.89 
 
 
285 aa  248  1e-64  Meiothermus ruber DSM 1279  Bacteria  normal  0.84446  hitchhiker  0.0000450272 
 
 
-
 
NC_013595  Sros_1325  formate dehydrogenase  50.71 
 
 
282 aa  245  6e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.201918 
 
 
-
 
NC_013235  Namu_1855  formate dehydrogenase family accessory protein FdhD  51.62 
 
 
275 aa  244  9.999999999999999e-64  Nakamurella multipartita DSM 44233  Bacteria  normal  0.121584  normal  0.0332237 
 
 
-
 
NC_013037  Dfer_2665  formate dehydrogenase family accessory protein FdhD  47.15 
 
 
275 aa  243  1.9999999999999999e-63  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29960  formate dehydrogenase family accessory protein FdhD  52.04 
 
 
290 aa  239  5e-62  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4385  formate dehydrogenase family accessory protein FdhD  50.53 
 
 
288 aa  237  2e-61  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4019  formate dehydrogenase family accessory protein FdhD  50.19 
 
 
288 aa  235  8e-61  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1335  formate dehydrogenase family accessory protein FdhD  47.4 
 
 
289 aa  233  2.0000000000000002e-60  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000543766 
 
 
-
 
NC_013730  Slin_3157  formate dehydrogenase family accessory protein FdhD  47.41 
 
 
281 aa  226  4e-58  Spirosoma linguale DSM 74  Bacteria  normal  0.630603  normal 
 
 
-
 
NC_013739  Cwoe_5379  formate dehydrogenase family accessory protein FdhD  52.55 
 
 
248 aa  215  8e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.0597745  normal 
 
 
-
 
NC_008010  Dgeo_2744  formate dehydrogenase family accessory protein FdhD  51.24 
 
 
251 aa  213  1.9999999999999998e-54  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_0065  formate dehydrogenase family accessory protein FdhD  44.48 
 
 
277 aa  198  7e-50  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.255284 
 
 
-
 
NC_011145  AnaeK_0873  formate dehydrogenase family accessory protein FdhD  50.75 
 
 
288 aa  198  7.999999999999999e-50  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0877  formate dehydrogenase family accessory protein FdhD  50.75 
 
 
288 aa  197  2.0000000000000003e-49  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_0639  formate dehydrogenase family accessory protein FdhD  39.35 
 
 
255 aa  195  8.000000000000001e-49  Sulfolobus solfataricus 98/2  Archaea  normal  0.444789  n/a   
 
 
-
 
NC_013132  Cpin_4073  formate dehydrogenase family accessory protein FdhD  40.89 
 
 
280 aa  194  2e-48  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.110434  normal  0.0860258 
 
 
-
 
NC_008699  Noca_2698  formate dehydrogenase, subunit FdhD  50.41 
 
 
283 aa  188  1e-46  Nocardioides sp. JS614  Bacteria  normal  0.0902014  n/a   
 
 
-
 
NC_008709  Ping_2123  formate dehydrogenase, subunit FdhD  39.78 
 
 
319 aa  187  2e-46  Psychromonas ingrahamii 37  Bacteria  normal  0.951323  hitchhiker  0.00982991 
 
 
-
 
NC_007760  Adeh_0826  formate dehydrogenase family accessory protein FdhD  50.94 
 
 
288 aa  184  1.0000000000000001e-45  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_1320  formate dehydrogenase family accessory protein FdhD  41.63 
 
 
254 aa  177  2e-43  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_009675  Anae109_3047  formate dehydrogenase family accessory protein FdhD  41.33 
 
 
294 aa  171  1e-41  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_4145  formate dehydrogenase family accessory protein FdhD  44.78 
 
 
321 aa  165  9e-40  Opitutus terrae PB90-1  Bacteria  normal  normal  0.197477 
 
 
-
 
NC_008554  Sfum_0034  formate dehydrogenase family accessory protein FdhD  39.77 
 
 
267 aa  152  5.9999999999999996e-36  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.190286  normal  0.450468 
 
 
-
 
NC_008786  Veis_2382  formate dehydrogenase family accessory protein FdhD  37.36 
 
 
277 aa  148  9e-35  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00469  formate dehydrogenase accessory protein  39.02 
 
 
273 aa  148  1.0000000000000001e-34  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_011894  Mnod_0254  formate dehydrogenase family accessory protein FdhD  38.71 
 
 
299 aa  145  1e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0343903  n/a   
 
 
-
 
NC_007947  Mfla_0719  formate dehydrogenase family accessory protein FdhD  37.16 
 
 
278 aa  144  1e-33  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_3578  formate dehydrogenase accessory protein  31.65 
 
 
265 aa  144  2e-33  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003910  CPS_4025  formate dehydrogenase accessory protein FdhD  32.27 
 
 
283 aa  141  9.999999999999999e-33  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2149  formate dehydrogenase family accessory protein FdhD  39.06 
 
 
282 aa  140  3e-32  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1343  formate dehydrogenase accessory protein  34.15 
 
 
263 aa  140  3e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010511  M446_2355  formate dehydrogenase family accessory protein FdhD  40.47 
 
 
283 aa  139  4.999999999999999e-32  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK3278  formate dehydrogenase accessory protein  30.94 
 
 
265 aa  138  1e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0620  formate dehydrogenase accessory protein  38.11 
 
 
288 aa  138  1e-31  Ralstonia eutropha JMP134  Bacteria  normal  0.979772  n/a   
 
 
-
 
NC_008228  Patl_2845  formate dehydrogenase, subunit FdhD  35.47 
 
 
287 aa  138  1e-31  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1390  formate dehydrogenase accessory protein FdhD  37.83 
 
 
306 aa  137  2e-31  Methylococcus capsulatus str. Bath  Bacteria  normal  0.780868  n/a   
 
 
-
 
NC_005945  BAS3364  formate dehydrogenase accessory protein  30.99 
 
 
265 aa  137  2e-31  Bacillus anthracis str. Sterne  Bacteria  normal  0.144836  n/a   
 
 
-
 
NC_007530  GBAA_3628  formate dehydrogenase accessory protein  30.99 
 
 
265 aa  137  2e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3924  formate dehydrogenase accessory protein  38.34 
 
 
274 aa  136  4e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.789424  normal 
 
 
-
 
NC_009668  Oant_3819  formate dehydrogenase accessory protein  35.27 
 
 
269 aa  136  5e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.934196  n/a   
 
 
-
 
NC_003909  BCE_3585  formate dehydrogenase accessory protein  30.28 
 
 
265 aa  135  6.0000000000000005e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0654  formate dehydrogenase accessory protein  32.17 
 
 
268 aa  135  7.000000000000001e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1537  formate dehydrogenase family accessory protein FdhD  37.84 
 
 
257 aa  135  9e-31  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000559479  n/a   
 
 
-
 
NC_011369  Rleg2_3635  formate dehydrogenase accessory protein  38.34 
 
 
274 aa  135  9.999999999999999e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.222739 
 
 
-
 
NC_005945  BAS0556  formate dehydrogenase accessory protein  32.56 
 
 
268 aa  134  9.999999999999999e-31  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0498  formate dehydrogenase accessory protein  32.56 
 
 
268 aa  134  9.999999999999999e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3328  formate dehydrogenase accessory protein  30.63 
 
 
265 aa  135  9.999999999999999e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0183588  n/a   
 
 
-
 
NC_007530  GBAA_0588  formate dehydrogenase accessory protein  32.56 
 
 
268 aa  134  9.999999999999999e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3678  formate dehydrogenase accessory protein  30.28 
 
 
265 aa  134  9.999999999999999e-31  Bacillus cereus B4264  Bacteria  normal  0.688402  n/a   
 
 
-
 
NC_011658  BCAH187_A3595  formate dehydrogenase accessory protein  30.28 
 
 
265 aa  135  9.999999999999999e-31  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0715  formate dehydrogenase accessory protein  30.6 
 
 
268 aa  135  9.999999999999999e-31  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0644  formate dehydrogenase accessory protein  32.56 
 
 
268 aa  134  9.999999999999999e-31  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_012791  Vapar_3020  formate dehydrogenase family accessory protein FdhD  38.31 
 
 
278 aa  133  3e-30  Variovorax paradoxus S110  Bacteria  normal  0.848082  n/a   
 
 
-
 
NC_006274  BCZK0500  formate dehydrogenase accessory protein  32.17 
 
 
268 aa  132  7.999999999999999e-30  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0626  formate dehydrogenase accessory protein  31.78 
 
 
268 aa  131  1.0000000000000001e-29  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3264  formate dehydrogenase family accessory protein FdhD  36.88 
 
 
291 aa  130  2.0000000000000002e-29  Methylobacterium extorquens PA1  Bacteria  normal  0.859238  normal  0.14649 
 
 
-
 
NC_009253  Dred_2876  formate dehydrogenase family accessory protein FdhD  34.96 
 
 
262 aa  131  2.0000000000000002e-29  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0487293  n/a   
 
 
-
 
NC_010505  Mrad2831_0034  formate dehydrogenase family accessory protein FdhD  38.1 
 
 
280 aa  130  2.0000000000000002e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.663186 
 
 
-
 
NC_007973  Rmet_0556  formate dehydrogenase accessory protein  36.23 
 
 
281 aa  131  2.0000000000000002e-29  Cupriavidus metallidurans CH34  Bacteria  normal  0.152789  normal  0.415785 
 
 
-
 
NC_013512  Sdel_2060  formate dehydrogenase family accessory protein FdhD  32.58 
 
 
262 aa  129  4.0000000000000003e-29  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.0000863556  n/a   
 
 
-
 
NC_011757  Mchl_3588  formate dehydrogenase family accessory protein FdhD  36.88 
 
 
291 aa  129  4.0000000000000003e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4711  formate dehydrogenase accessory protein  31.4 
 
 
268 aa  129  5.0000000000000004e-29  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0504  formate dehydrogenase accessory protein  29.43 
 
 
269 aa  129  6e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3516  formate dehydrogenase family accessory protein FdhD  35.92 
 
 
294 aa  129  8.000000000000001e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0200  formate dehydrogenase family accessory protein FdhD  37.93 
 
 
272 aa  128  1.0000000000000001e-28  Thauera sp. MZ1T  Bacteria  normal  0.754057  n/a   
 
 
-
 
NC_007651  BTH_I0569  formate dehydrogenase family accessory protein FdhD  37.45 
 
 
274 aa  125  6e-28  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1030  formate dehydrogenase accessory protein  35.79 
 
 
263 aa  125  8.000000000000001e-28  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0501  formate dehydrogenase accessory protein  30.5 
 
 
268 aa  124  1e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4562  formate dehydrogenase family accessory protein FdhD  35.8 
 
 
277 aa  125  1e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0690  formate dehydrogenase family accessory protein FdhD  34.47 
 
 
285 aa  124  2e-27  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0699  formate dehydrogenase accessory protein FdhD  37.14 
 
 
274 aa  124  2e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
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