| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1855 |
|---|
| Symbol | |
|---|
| ID | 8447462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 2040616 |
|---|
| End bp | 2041443 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645040985 |
|---|
| Product | formate dehydrogenase family accessory protein FdhD |
|---|
| Protein accession | YP_003201233 |
|---|
| Protein GI | 258652077 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.121584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0332237 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGGG TCACCGTGCG CACGCCGATC GTGCGGTACC GCGACGGCGC CTTCTCCAGC
CGGCCGGACA CCGTGGCCGG CGAGGAGCCG CTGGAGATCC GGGTCGACGG CCAGCCCTTC
TCCACGACCA TGCGGACCCC GGGGGCCGAC ATCGAGCTGG CCCATGGCCT GCTGCATGCC
GAGGGCGTCA TCACCGGCCC GGCGGACGTC CGGGCCGCTC GCTACTGCTC CGGCGTCGGT
CCGGACGGCC TGAAGACCTA CAACGTGCTC GAGGTCAGCC TGGCCGACTC CGCGGCGACC
GCGCAGCTGT GGCCACGGTC CCTGGTGACC AGCTCGGCGT GCGGGGTCTG CGGATCGGAG
TCGATCGAGG CGATCACCCG CAGCAGCCGC TACGTGCCCG GCCAGCTCAC GATGGCCCCG
GACACGATCC GCGCCCTGCC CGAGCGGCTG CGGGCGCAGC AGCGCACGTT CCGCAGCACC
GGCGGCATCC ACGCCTGCGC CCTGGCCACC GCCGACGGCC TGATCGAGGA CGTCCGTGAG
GACGTCGGCC GGCACAACGC GATGGACAAG GTGATCGGGG CCGCGCTGCT CGCCGACCGC
CTGCCGCTGG CCGACCGGGC CCTGGTCACC TCGTCCCGGG CCTCGTTCGA GCTGGTGCAG
AAGGCGGTGC TGGCCGGCGT CGGGATCCTG GTCGCCGTCT CCGCCCCGTC CTCGCTGGCG
GTGCAACTGG CCGGGCAGGC CGGGCTGACC CTGATCGGGT TCGTCTCCCC CGCCGGGTTC
AACATCTATA CGGGTGGCTG GCGGGTCCAC GGCGCCACCC AGCGGTAA
|
|---|
| Protein sequence | MSRVTVRTPI VRYRDGAFSS RPDTVAGEEP LEIRVDGQPF STTMRTPGAD IELAHGLLHA
EGVITGPADV RAARYCSGVG PDGLKTYNVL EVSLADSAAT AQLWPRSLVT SSACGVCGSE
SIEAITRSSR YVPGQLTMAP DTIRALPERL RAQQRTFRST GGIHACALAT ADGLIEDVRE
DVGRHNAMDK VIGAALLADR LPLADRALVT SSRASFELVQ KAVLAGVGIL VAVSAPSSLA
VQLAGQAGLT LIGFVSPAGF NIYTGGWRVH GATQR
|
|---|
| |