More than 300 homologs were found in PanDaTox collection
for query gene Ndas_4114 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_4114  formate dehydrogenase family accessory protein FdhD  100 
 
 
293 aa  585  1e-166  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3534  formate dehydrogenase family accessory protein FdhD  70.53 
 
 
284 aa  397  1e-109  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4473  formate dehydrogenase family accessory protein FdhD  66.3 
 
 
276 aa  357  9.999999999999999e-98  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.979472  n/a   
 
 
-
 
NC_013093  Amir_1157  formate dehydrogenase family accessory protein FdhD  62.87 
 
 
274 aa  349  3e-95  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3645  formate dehydrogenase accessory protein  62.87 
 
 
274 aa  345  6e-94  Mycobacterium sp. KMS  Bacteria  normal  normal  0.259742 
 
 
-
 
NC_008146  Mmcs_3572  formate dehydrogenase accessory protein  62.87 
 
 
274 aa  345  6e-94  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3577  formate dehydrogenase accessory protein  62.87 
 
 
274 aa  345  6e-94  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4033  formate dehydrogenase accessory protein  60.7 
 
 
287 aa  343  1e-93  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.681532  normal  0.294632 
 
 
-
 
NC_014158  Tpau_2346  formate dehydrogenase family accessory protein FdhD  63.41 
 
 
284 aa  342  4e-93  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.36394  n/a   
 
 
-
 
NC_007333  Tfu_1624  formate dehydrogenase accessory protein  63 
 
 
275 aa  338  8e-92  Thermobifida fusca YX  Bacteria  normal  0.199677  n/a   
 
 
-
 
NC_013159  Svir_12240  formate dehydrogenase family accessory protein FdhD  62.31 
 
 
272 aa  337  9.999999999999999e-92  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2593  formate dehydrogenase accessory protein  64.84 
 
 
278 aa  334  1e-90  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2306  formate dehydrogenase accessory protein  61.4 
 
 
286 aa  332  7.000000000000001e-90  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12913  formate dehydrogenase accessory protein  59.27 
 
 
276 aa  324  1e-87  Mycobacterium tuberculosis F11  Bacteria  normal  0.167876  normal 
 
 
-
 
NC_013441  Gbro_3682  formate dehydrogenase subunit FdhD  60.58 
 
 
279 aa  322  5e-87  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0802  formate dehydrogenase family accessory protein FdhD  59.86 
 
 
309 aa  317  2e-85  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_15020  formate dehydrogenase family accessory protein FdhD  60.51 
 
 
281 aa  311  6.999999999999999e-84  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.503102  normal 
 
 
-
 
NC_011886  Achl_3467  formate dehydrogenase family accessory protein FdhD  60.07 
 
 
294 aa  309  4e-83  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_0829  formate dehydrogenase family accessory protein FdhD  54.39 
 
 
296 aa  309  4e-83  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.00158751 
 
 
-
 
NC_011886  Achl_0919  formate dehydrogenase family accessory protein FdhD  58.16 
 
 
292 aa  307  2.0000000000000002e-82  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009664  Krad_3339  formate dehydrogenase family accessory protein FdhD  54.91 
 
 
297 aa  284  1.0000000000000001e-75  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.224084 
 
 
-
 
NC_011726  PCC8801_0758  formate dehydrogenase family accessory protein FdhD  50.37 
 
 
299 aa  284  1.0000000000000001e-75  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0784  formate dehydrogenase family accessory protein FdhD  50.37 
 
 
299 aa  283  2.0000000000000002e-75  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0300  formate dehydrogenase family accessory protein FdhD  53.99 
 
 
268 aa  283  3.0000000000000004e-75  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0145  formate dehydrogenase family accessory protein FdhD  56.06 
 
 
289 aa  283  3.0000000000000004e-75  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0667  formate dehydrogenase, subunit FdhD  50 
 
 
320 aa  282  4.0000000000000003e-75  Acidothermus cellulolyticus 11B  Bacteria  normal  0.187577  normal 
 
 
-
 
NC_008312  Tery_0406  formate dehydrogenase family accessory protein FdhD  51.12 
 
 
284 aa  279  4e-74  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2115  formate dehydrogenase family accessory protein FdhD  55.19 
 
 
273 aa  274  1.0000000000000001e-72  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2130  formate dehydrogenase family accessory protein FdhD  56.2 
 
 
283 aa  274  1.0000000000000001e-72  Meiothermus silvanus DSM 9946  Bacteria  normal  0.455912  normal  0.581272 
 
 
-
 
NC_013595  Sros_1325  formate dehydrogenase  53.85 
 
 
282 aa  271  8.000000000000001e-72  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.201918 
 
 
-
 
NC_013037  Dfer_2665  formate dehydrogenase family accessory protein FdhD  51.45 
 
 
275 aa  270  2e-71  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1914  formate dehydrogenase family accessory protein FdhD  52.88 
 
 
285 aa  270  2e-71  Meiothermus ruber DSM 1279  Bacteria  normal  0.84446  hitchhiker  0.0000450272 
 
 
-
 
NC_009767  Rcas_4385  formate dehydrogenase family accessory protein FdhD  55.4 
 
 
288 aa  269  4e-71  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1855  formate dehydrogenase family accessory protein FdhD  52.21 
 
 
275 aa  266  2.9999999999999995e-70  Nakamurella multipartita DSM 44233  Bacteria  normal  0.121584  normal  0.0332237 
 
 
-
 
NC_009523  RoseRS_4019  formate dehydrogenase family accessory protein FdhD  52.36 
 
 
288 aa  262  6e-69  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29960  formate dehydrogenase family accessory protein FdhD  51.07 
 
 
290 aa  248  6e-65  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_3157  formate dehydrogenase family accessory protein FdhD  49.45 
 
 
281 aa  248  1e-64  Spirosoma linguale DSM 74  Bacteria  normal  0.630603  normal 
 
 
-
 
NC_011831  Cagg_1335  formate dehydrogenase family accessory protein FdhD  46.92 
 
 
289 aa  240  2e-62  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000543766 
 
 
-
 
NC_013132  Cpin_4073  formate dehydrogenase family accessory protein FdhD  44.2 
 
 
280 aa  221  1.9999999999999999e-56  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.110434  normal  0.0860258 
 
 
-
 
NC_013739  Cwoe_5379  formate dehydrogenase family accessory protein FdhD  51.38 
 
 
248 aa  217  2e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.0597745  normal 
 
 
-
 
CP001800  Ssol_0639  formate dehydrogenase family accessory protein FdhD  42.38 
 
 
255 aa  210  2e-53  Sulfolobus solfataricus 98/2  Archaea  normal  0.444789  n/a   
 
 
-
 
NC_011891  A2cp1_0877  formate dehydrogenase family accessory protein FdhD  48.71 
 
 
288 aa  206  5e-52  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0873  formate dehydrogenase family accessory protein FdhD  49.81 
 
 
288 aa  205  6e-52  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_1320  formate dehydrogenase family accessory protein FdhD  44.28 
 
 
254 aa  205  9e-52  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_008010  Dgeo_2744  formate dehydrogenase family accessory protein FdhD  48.97 
 
 
251 aa  199  5e-50  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_0065  formate dehydrogenase family accessory protein FdhD  44.52 
 
 
277 aa  196  4.0000000000000005e-49  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.255284 
 
 
-
 
NC_008699  Noca_2698  formate dehydrogenase, subunit FdhD  48.29 
 
 
283 aa  194  2e-48  Nocardioides sp. JS614  Bacteria  normal  0.0902014  n/a   
 
 
-
 
NC_007760  Adeh_0826  formate dehydrogenase family accessory protein FdhD  48.34 
 
 
288 aa  190  2e-47  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2123  formate dehydrogenase, subunit FdhD  37.87 
 
 
319 aa  182  4.0000000000000006e-45  Psychromonas ingrahamii 37  Bacteria  normal  0.951323  hitchhiker  0.00982991 
 
 
-
 
NC_009675  Anae109_3047  formate dehydrogenase family accessory protein FdhD  43.35 
 
 
294 aa  171  2e-41  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_4145  formate dehydrogenase family accessory protein FdhD  45.42 
 
 
321 aa  167  2e-40  Opitutus terrae PB90-1  Bacteria  normal  normal  0.197477 
 
 
-
 
NC_008554  Sfum_0034  formate dehydrogenase family accessory protein FdhD  38.01 
 
 
267 aa  160  2e-38  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.190286  normal  0.450468 
 
 
-
 
NC_002977  MCA1390  formate dehydrogenase accessory protein FdhD  38.91 
 
 
306 aa  152  5.9999999999999996e-36  Methylococcus capsulatus str. Bath  Bacteria  normal  0.780868  n/a   
 
 
-
 
NC_010717  PXO_00469  formate dehydrogenase accessory protein  35.9 
 
 
273 aa  147  2.0000000000000003e-34  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_009943  Dole_1537  formate dehydrogenase family accessory protein FdhD  38.2 
 
 
257 aa  147  3e-34  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000559479  n/a   
 
 
-
 
NC_013411  GYMC61_1343  formate dehydrogenase accessory protein  34.8 
 
 
263 aa  146  4.0000000000000006e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_2845  formate dehydrogenase, subunit FdhD  35.09 
 
 
287 aa  144  1e-33  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3585  formate dehydrogenase accessory protein  29.3 
 
 
265 aa  144  2e-33  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0719  formate dehydrogenase family accessory protein FdhD  35.74 
 
 
278 aa  143  3e-33  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A3595  formate dehydrogenase accessory protein  29.3 
 
 
265 aa  143  3e-33  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3678  formate dehydrogenase accessory protein  28.94 
 
 
265 aa  142  5e-33  Bacillus cereus B4264  Bacteria  normal  0.688402  n/a   
 
 
-
 
NC_006274  BCZK3278  formate dehydrogenase accessory protein  29.3 
 
 
265 aa  142  8e-33  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3374  formate dehydrogenase family accessory protein FdhD  34.56 
 
 
260 aa  140  3e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2876  formate dehydrogenase family accessory protein FdhD  35.85 
 
 
262 aa  140  3e-32  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0487293  n/a   
 
 
-
 
NC_011773  BCAH820_3578  formate dehydrogenase accessory protein  28.94 
 
 
265 aa  139  3.9999999999999997e-32  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS3364  formate dehydrogenase accessory protein  28.94 
 
 
265 aa  139  4.999999999999999e-32  Bacillus anthracis str. Sterne  Bacteria  normal  0.144836  n/a   
 
 
-
 
NC_005957  BT9727_3328  formate dehydrogenase accessory protein  28.94 
 
 
265 aa  139  4.999999999999999e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0183588  n/a   
 
 
-
 
NC_007530  GBAA_3628  formate dehydrogenase accessory protein  28.94 
 
 
265 aa  139  4.999999999999999e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4025  formate dehydrogenase accessory protein FdhD  32.85 
 
 
283 aa  139  7e-32  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2382  formate dehydrogenase family accessory protein FdhD  36.22 
 
 
277 aa  139  7e-32  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3460  formate dehydrogenase family accessory protein FdhD  37.3 
 
 
291 aa  136  3.0000000000000003e-31  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4096  formate dehydrogenase family accessory protein FdhD  36.88 
 
 
274 aa  135  6.0000000000000005e-31  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_0254  formate dehydrogenase family accessory protein FdhD  35.85 
 
 
299 aa  135  9.999999999999999e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0343903  n/a   
 
 
-
 
NC_005945  BAS0556  formate dehydrogenase accessory protein  29.89 
 
 
268 aa  134  1.9999999999999998e-30  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0498  formate dehydrogenase accessory protein  29.89 
 
 
268 aa  134  1.9999999999999998e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0626  formate dehydrogenase accessory protein  29.86 
 
 
268 aa  134  1.9999999999999998e-30  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0588  formate dehydrogenase accessory protein  29.89 
 
 
268 aa  134  1.9999999999999998e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0715  formate dehydrogenase accessory protein  29.54 
 
 
268 aa  134  1.9999999999999998e-30  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0644  formate dehydrogenase accessory protein  29.89 
 
 
268 aa  134  1.9999999999999998e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011757  Mchl_3588  formate dehydrogenase family accessory protein FdhD  36.51 
 
 
291 aa  134  3e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0108  formate dehydrogenase accessory protein  32.84 
 
 
278 aa  133  3e-30  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3264  formate dehydrogenase family accessory protein FdhD  36.51 
 
 
291 aa  133  3.9999999999999996e-30  Methylobacterium extorquens PA1  Bacteria  normal  0.859238  normal  0.14649 
 
 
-
 
NC_008577  Shewana3_0108  formate dehydrogenase accessory protein  32.96 
 
 
278 aa  132  5e-30  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0103  formate dehydrogenase accessory protein  32.84 
 
 
278 aa  132  6e-30  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0654  formate dehydrogenase accessory protein  29.78 
 
 
268 aa  132  7.999999999999999e-30  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3819  formate dehydrogenase accessory protein  37.2 
 
 
269 aa  132  1.0000000000000001e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.934196  n/a   
 
 
-
 
NC_004347  SO_0107  formate dehydrogenase accessory protein  32.96 
 
 
278 aa  131  1.0000000000000001e-29  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_006274  BCZK0500  formate dehydrogenase accessory protein  29.54 
 
 
268 aa  131  1.0000000000000001e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4711  formate dehydrogenase accessory protein  29.5 
 
 
268 aa  131  1.0000000000000001e-29  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0034  formate dehydrogenase family accessory protein FdhD  37.01 
 
 
280 aa  132  1.0000000000000001e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.663186 
 
 
-
 
NC_009674  Bcer98_0504  formate dehydrogenase accessory protein  30.32 
 
 
269 aa  130  2.0000000000000002e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3516  formate dehydrogenase family accessory protein FdhD  34.84 
 
 
294 aa  131  2.0000000000000002e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3020  formate dehydrogenase family accessory protein FdhD  36.5 
 
 
278 aa  129  5.0000000000000004e-29  Variovorax paradoxus S110  Bacteria  normal  0.848082  n/a   
 
 
-
 
NC_010511  M446_2355  formate dehydrogenase family accessory protein FdhD  36.47 
 
 
283 aa  129  5.0000000000000004e-29  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3635  formate dehydrogenase accessory protein  36.59 
 
 
274 aa  129  7.000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.222739 
 
 
-
 
NC_012793  GWCH70_0466  formate dehydrogenase accessory protein  33.96 
 
 
262 aa  128  1.0000000000000001e-28  Geobacillus sp. WCH70  Bacteria  normal  0.276769  n/a   
 
 
-
 
NC_011004  Rpal_0806  formate dehydrogenase accessory protein  34.18 
 
 
276 aa  127  1.0000000000000001e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0665  formate dehydrogenase family accessory protein FdhD  34.22 
 
 
279 aa  127  2.0000000000000002e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  0.223999  normal 
 
 
-
 
NC_010184  BcerKBAB4_0501  formate dehydrogenase accessory protein  28.78 
 
 
268 aa  127  3e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0211  formate dehydrogenase accessory protein  32.46 
 
 
260 aa  126  4.0000000000000003e-28  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>