Gene Ksed_15020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15020 
Symbol 
ID8373009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1541711 
End bp1542556 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content73% 
IMG OID644991772 
Productformate dehydrogenase family accessory protein FdhD 
Protein accessionYP_003149290 
Protein GI256825330 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.503102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGCA TCACCGTCCG CCGGCCGGTC CGGCGCATCC GAGGCAGCGA GCCGCCGCGC 
CGTGTCGTGG ACACCCTGGC CGCGGAGGAG CCGCTGGAGA TCCGCATCGC CGGCACCCCC
CTGGCCGTGA CCATGCGCAC CCCCGGGCAC GACGTCGAGC TCGCCACCGG GTTCCTGGTC
TCCGAGGGCA TCATCCGCAC GGCGTCGGAT GTCCGCGCCG CCATCCACTG CGGCGGGCCG
GGCACGGGGG GTGGTCAGGC CAACACCTAC AACGTACTCG ACCTCGCGTT GGCCGACCAC
GTGCCGCCGG TGCCGGCCTC GGCCGAGCGG AACTTCTACA CCACCAGCAG CTGCGGCGTC
TGCGGCAAGG CCAGCATCGA GGCCGTCCAC ACGGTCTCCG CCCACGACCT GCACGCCGAT
GCGGTGACCC TCACCCCGGA GCGCATCGCC GGGTTCCCCG TCGCGCTGCG CCGGGCCCAG
GAGGTGTTCG AGCGCACCGG GGGACTCCAC GCCGCGGGGC TCTTCGACCC CGCCACCGGT
GAGGCGCTCG TGGTCCGCGA GGACGTCGGC CGCCACAACG CGGTCGACAA GGTCATCGGG
TGGGCCGCGA TGCAGGACCG CTTGCCCGCC GCCGGCACCG TGCTGCAGGT CTCGGGTCGG
GCCAGCTTCG AGCTCGTGCA GAAGGCGGTC ATGGCGGGCA TCCCGGTGCT GACGGCCGTC
TCGGCGCCCT CCTCGCTTGC GGTCGAGCTG GCCGACTCCT CCGGTCTGAC GCTGGTCGGT
TTCGTGCGCG GCGACTCCAT GAACGTCTAC ACCCACGCCG AGCGGGTCGA GGGCGTCACC
GAGTGA
 
Protein sequence
MGRITVRRPV RRIRGSEPPR RVVDTLAAEE PLEIRIAGTP LAVTMRTPGH DVELATGFLV 
SEGIIRTASD VRAAIHCGGP GTGGGQANTY NVLDLALADH VPPVPASAER NFYTTSSCGV
CGKASIEAVH TVSAHDLHAD AVTLTPERIA GFPVALRRAQ EVFERTGGLH AAGLFDPATG
EALVVREDVG RHNAVDKVIG WAAMQDRLPA AGTVLQVSGR ASFELVQKAV MAGIPVLTAV
SAPSSLAVEL ADSSGLTLVG FVRGDSMNVY THAERVEGVT E