Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2123 |
Symbol | |
ID | 4623980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2586744 |
End bp | 2587703 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639797265 |
Product | formate dehydrogenase, subunit FdhD |
Protein accession | YP_943467 |
Protein GI | 119945787 |
COG category | [C] Energy production and conversion |
COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.951323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00982991 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGAGC AGAAAGTAAA TCAGGAAGAT GATTGGTTAG GTCATAAAGA TTCAGCTTTT AAGGTTAATT TTGATCAAAA TAGTCAGCAA CTATATCAAT CAAGCTTAAA TACTCCGAGT GTCGTGACAT GTTCACGTCA GAAGATAAAT GGCACACAAG TAAGCCTTTC TATTGATTCC GTGATTGTCG AAGAACCCCT ACAGATTAGC TTGATTTATA GCGACAGATT GGGCCATGAA CAAGAGCGTA TTTACTTAGT GACAATGCGC ACACCGGGTG ACGACCTTAA TCTGGTGACT GGGTTATTGT TGGCCGAAGG TATTATAAAA AAAGCCCGCG ACATTACAGG TATCAATGAT CAACTAGATA CCGATGAAAT CTTCCGCAAT AAAATAAATG TGCACTTATC AGCGAATGTG GTTGTTGACT GGGCATTAAT CAATAGAGAT ACAACCTCAT TCTCCAGTTG CGGAGTGTGT GGTAAATCAT CAATACAGTC TTTAGAGCTA CGTGATATTC CCGCTTTAGA CACGGCGGAA CACTGGTTGT CGGGTCATAT TATTCCTTAT TTCGGCGATC AATTGCGTCA ATCTCAAGCG ATGTTTATGC AAACGGGCGG GGTGCATGGC TGCGGCTTAT TCGATGCTAA AGGCGCTTTA TTATTGAGCT GCGAAGATGT CGGGCGTCAT AACGCTTTAG ATAAATTGAT CGGTAAATTA GCAAGAAGCG CAACGCTTGA TCAGCAAAAA AAAATTGTAT TCCTAAGCGG TCGTATCAGT TTTGAGTTGG TTCAGAAAGT GCTTGTTGCT GGCATTTCTG TACTGGTCGC TGTCGGGGCA CCATCAAATC TCGCTATCAA TATAGCAAAA CGTTTCAATT TAACACTTAT CGGCTTTAGT CGTAATGGCG GATTTAATAT CTACCATGGT GCTTTCCGTT TAAATCTGAC CACCGAATAG
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Protein sequence | MAEQKVNQED DWLGHKDSAF KVNFDQNSQQ LYQSSLNTPS VVTCSRQKIN GTQVSLSIDS VIVEEPLQIS LIYSDRLGHE QERIYLVTMR TPGDDLNLVT GLLLAEGIIK KARDITGIND QLDTDEIFRN KINVHLSANV VVDWALINRD TTSFSSCGVC GKSSIQSLEL RDIPALDTAE HWLSGHIIPY FGDQLRQSQA MFMQTGGVHG CGLFDAKGAL LLSCEDVGRH NALDKLIGKL ARSATLDQQK KIVFLSGRIS FELVQKVLVA GISVLVAVGA PSNLAINIAK RFNLTLIGFS RNGGFNIYHG AFRLNLTTE
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