| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3478 |
|---|
| Symbol | |
|---|
| ID | 5423895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 3871257 |
|---|
| End bp | 3872135 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640882733 |
|---|
| Product | formate dehydrogenase family accessory protein FdhD |
|---|
| Protein accession | YP_001418364 |
|---|
| Protein GI | 154247406 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.739751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.474196 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA CCGCCTCCAC CTGCGCGCTG ACGCAGGACA CCGCCCTCCC CGCCCCGCCC
CCGGCGCGGC GGGTGGAGCG CGTGCAGGTG CGGGACGGCG CGGTTTCCAC GGGAGAGCGG
GCGGTGCCCG AGGAAGTGCC GGTCGCCCTC ACCTTCAACG GCACCACCCA TGCGGTGATG
ATGGCGAGCC CGACCGACAT CGCCGACTTC GCCCTTGGCT TCGCCCTCAC CGAGGGCATC
GTCGCCTCGC CTGCCGAGAT CCTGTCCCGC GAGGTGATCG TGGTGGACGA GGGCATCGAG
GCCCGCATGT GGATCGCCGA AGAGAAGATG AAGCATCTCT CCGCCCGGCG CCGGGCGCTG
GCCGGGCCCA CCGGCTGTGG CCTGTGCGGG GTGGAGAGCC TTGCCGAGGC GGTGAAGCCG
GCGGCGCTGG TGACGGCGGA CACCCACTTC TCCCCGGCGA CGCTGCTCGA CGCCATGGCC
GCACTCGGCC CGCTCCAGAG CCTCAACCAT GAGACCCGCG CGGTGCATGC GGCGGCCTAT
TTCGAGCCCG GCCGCGGCAT CCTCGCCCTG GCCGAGGACG TGGGCCGGCA CAATGCCCTC
GACAAGCTGG TGGGCAAGGC GGCGGAGGCC GGCTTCGATG CCGCGCGCGG CCTGCTGCTG
CTGACCAGCC GCGTCTCCAT CGAGATGGTT CAGAAGGCGG CGGTGCTGGG CGTGGGCGTC
ATTGCAGCCG TCTCGGCGCC GACATCGCTC GCCATCCGCA CCGCCGACGC GGCGGGCATC
ACCCTGTGCG CCATCGTGCG GCAGGATGGC TTCGAGATCT TCACCCATCC CGGGCGCATC
GCCCTCCCCT CACCGGAACG GCAGAACCAT GTCGCATAG
|
|---|
| Protein sequence | MTDTASTCAL TQDTALPAPP PARRVERVQV RDGAVSTGER AVPEEVPVAL TFNGTTHAVM
MASPTDIADF ALGFALTEGI VASPAEILSR EVIVVDEGIE ARMWIAEEKM KHLSARRRAL
AGPTGCGLCG VESLAEAVKP AALVTADTHF SPATLLDAMA ALGPLQSLNH ETRAVHAAAY
FEPGRGILAL AEDVGRHNAL DKLVGKAAEA GFDAARGLLL LTSRVSIEMV QKAAVLGVGV
IAAVSAPTSL AIRTADAAGI TLCAIVRQDG FEIFTHPGRI ALPSPERQNH VA
|
|---|
| |