Gene Smed_2896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2896 
Symbol 
ID5323773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3037478 
End bp3038386 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content66% 
IMG OID640791848 
Productformate dehydrogenase accessory protein 
Protein accessionYP_001328561 
Protein GI150398094 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.805678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCA AGCGCGTTTC GACCTCTCCA ACGGTTGTTC CGGCCGGCGC CGGCGGCGCG 
CCCCGACCAG GAACGACGGC GACGGTTGCC GAGGCTGCAC GGCGCGGCGG TATCTTCGTC
GCGCAATCGC GGGTGGTGCC CGAGGAAATG CCGGTTGCCT TCACCTATGG CGGTTCGACT
CATGCGGTGA TGATGGCGAC GCCCGCCGAC CTCGAGGATT TCGCCACCGG CTTCAGCCTC
ACTGAAGGGA TCATCACCGG TCCCGAACAG ATAGACGACA TAGACATCGT TGCCGAGGAG
AAGGGCATCG ACCTGCAGAT CAGGCTCAAG GACGAGCAGA ACGACGCTCT GCGCCTCAGG
CGTCGCCACA TGGCCGGGCC GGTCGGTTGC GGCCTCTGCG GTATAGAGTC GATCGACGAG
GCCGTTCGCC CGACGCCGGA CGTCTCCGGC TCGCTGCTTC GCCTTTCCGA GCAGGACGTG
GTGGACGCAG TCGCGCTTCT CAATGGTCAG CAGCCGCTGC ATTTCGAGAC ACGCGCCGTC
CACGGTGCTG CCTTCTATGT GCCGGGGCGC GGGCTGATCG CGGTTCGCGA GGATGTCGGT
CGCCATAATG CGCTGGACAA GCTCACCGGA GCGGCCGCCC GCGCCGGGTT CAGGGGCGCT
CAAGGCGCAG TCGTCGTCAC CTCGCGCGTC TCGGTCGAGA TGGTGCAGAA AACCGCGATC
GCCGGAAGCC CGGTGATCAT CGCCATTTCC GCACCCACGG CGCTCGCGAT CCGCACGGCG
GAGGGGGCGG GCATGACCCT CATTGCGCTT GTCCGCGGTG ACGAGTTTGA AATCTTCACC
CATGCGGAGC GCATCGCTCG CCATGACGAG GTGCCTGCGT CCTTATCCGC CCGCGCACCG
CTATTCTGA
 
Protein sequence
MAGKRVSTSP TVVPAGAGGA PRPGTTATVA EAARRGGIFV AQSRVVPEEM PVAFTYGGST 
HAVMMATPAD LEDFATGFSL TEGIITGPEQ IDDIDIVAEE KGIDLQIRLK DEQNDALRLR
RRHMAGPVGC GLCGIESIDE AVRPTPDVSG SLLRLSEQDV VDAVALLNGQ QPLHFETRAV
HGAAFYVPGR GLIAVREDVG RHNALDKLTG AAARAGFRGA QGAVVVTSRV SVEMVQKTAI
AGSPVIIAIS APTALAIRTA EGAGMTLIAL VRGDEFEIFT HAERIARHDE VPASLSARAP
LF