More than 300 homologs were found in PanDaTox collection
for query gene Gbem_1293 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011146  Gbem_1293  formate dehydrogenase family accessory protein FdhD  100 
 
 		 255 aa  514  1.0000000000000001e-145  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0000222407  n/a   
 
 
-
 
NC_012918  GM21_2990  formate dehydrogenase family accessory protein FdhD  89.41 
 
 		 255 aa  463  1e-129  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.68227e-19 
 
 
-
 
NC_009483  Gura_3385  formate dehydrogenase family accessory protein FdhD  62.85 
 
 		 483 aa  325  6e-88  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_3370  formate dehydrogenase family accessory protein FdhD  63.71 
 
 		 487 aa  324  1e-87  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_2076  formate dehydrogenase, subunit FdhD  61.51 
 
 		 263 aa  312  3.9999999999999997e-84  Geobacter metallireducens GS-15  Bacteria  hitchhiker  9.82479e-16  normal  1 
 
 
-
 
NC_007517  Gmet_1062  formate dehydrogenase, subunit FdhD  62.95 
 
 		 479 aa  309  2.9999999999999997e-83  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0656292 
 
 
-
 
NC_002939  GSU0780  formate dehydrogenase accessory protein FdhD  62.45 
 
 		 478 aa  308  4e-83  Geobacter sulfurreducens PCA  Bacteria  normal  0.162723  n/a   
 
 
-
 
NC_012918  GM21_2817  formate dehydrogenase family accessory protein FdhD  56 
 
 		 255 aa  286  2.9999999999999996e-76  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_012918  GM21_1958  formate dehydrogenase family accessory protein FdhD  57.49 
 
 		 468 aa  285  5.999999999999999e-76  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011146  Gbem_2264  formate dehydrogenase family accessory protein FdhD  57.49 
 
 		 468 aa  285  5.999999999999999e-76  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_1437  formate dehydrogenase family accessory protein FdhD  54.8 
 
 		 255 aa  283  1.0000000000000001e-75  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0989  formate dehydrogenase family accessory protein FdhD  38.46 
 
 		 266 aa  170  2e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_2876  formate dehydrogenase family accessory protein FdhD  34.77 
 
 		 262 aa  152  4e-36  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0487293  n/a   
 
 
-
 
NC_009632  SaurJH1_2347  formate dehydrogenase accessory protein  32 
 
 		 265 aa  150  2e-35  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_2305  formate dehydrogenase accessory protein  32 
 
 		 265 aa  150  2e-35  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_2175  formate dehydrogenase family accessory protein FdhD  35.27 
 
 		 260 aa  145  6e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.145342 
 
 
-
 
NC_011773  BCAH820_3578  formate dehydrogenase accessory protein  31.78 
 
 		 265 aa  144  2e-33  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_011725  BCB4264_A3678  formate dehydrogenase accessory protein  30.98 
 
 		 265 aa  140  1.9999999999999998e-32  Bacillus cereus B4264  Bacteria  normal  0.688402  n/a   
 
 
-
 
NC_003909  BCE_3585  formate dehydrogenase accessory protein  30.59 
 
 		 265 aa  139  3.9999999999999997e-32  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_1840  formate dehydrogenase accessory protein  31.62 
 
 		 268 aa  139  3.9999999999999997e-32  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00380429  n/a   
 
 
-
 
NC_011658  BCAH187_A3595  formate dehydrogenase accessory protein  30.59 
 
 		 265 aa  139  3.9999999999999997e-32  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS3364  formate dehydrogenase accessory protein  31.25 
 
 		 265 aa  139  6e-32  Bacillus anthracis str. Sterne  Bacteria  normal  0.144836  n/a   
 
 
-
 
NC_007530  GBAA_3628  formate dehydrogenase accessory protein  31.25 
 
 		 265 aa  139  6e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_3328  formate dehydrogenase accessory protein  31.25 
 
 		 265 aa  138  8.999999999999999e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0183588  n/a   
 
 
-
 
NC_006274  BCZK3278  formate dehydrogenase accessory protein  30.86 
 
 		 265 aa  137  1e-31  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1205  formate dehydrogenase family accessory protein FdhD  35.74 
 
 		 303 aa  134  1.9999999999999998e-30  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.495294 
 
 
-
 
NC_010184  BcerKBAB4_0501  formate dehydrogenase accessory protein  29.53 
 
 		 268 aa  130  2.0000000000000002e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1343  formate dehydrogenase accessory protein  32.02 
 
 		 263 aa  130  2.0000000000000002e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_0504  formate dehydrogenase accessory protein  30.59 
 
 		 269 aa  129  4.0000000000000003e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_2277  formate dehydrogenase family accessory protein FdhD  33.05 
 
 		 258 aa  129  6e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.181166  normal  1 
 
 
-
 
NC_011658  BCAH187_A0715  formate dehydrogenase accessory protein  29.37 
 
 		 268 aa  127  1.0000000000000001e-28  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B4711  formate dehydrogenase accessory protein  28.69 
 
 		 268 aa  128  1.0000000000000001e-28  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A0626  formate dehydrogenase accessory protein  28.69 
 
 		 268 aa  126  3e-28  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_1030  formate dehydrogenase accessory protein  34.5 
 
 		 263 aa  126  3e-28  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_0654  formate dehydrogenase accessory protein  29.08 
 
 		 268 aa  125  5e-28  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS0556  formate dehydrogenase accessory protein  28.97 
 
 		 268 aa  125  8.000000000000001e-28  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_0498  formate dehydrogenase accessory protein  28.97 
 
 		 268 aa  125  8.000000000000001e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_0644  formate dehydrogenase accessory protein  28.97 
 
 		 268 aa  125  8.000000000000001e-28  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_007530  GBAA_0588  formate dehydrogenase accessory protein  28.97 
 
 		 268 aa  125  8.000000000000001e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK0500  formate dehydrogenase accessory protein  28.97 
 
 		 268 aa  124  1e-27  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_3374  formate dehydrogenase family accessory protein FdhD  31.08 
 
 		 260 aa  122  5e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013161  Cyan8802_0784  formate dehydrogenase family accessory protein FdhD  31.5 
 
 		 299 aa  122  5e-27  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011726  PCC8801_0758  formate dehydrogenase family accessory protein FdhD  32.02 
 
 		 299 aa  122  5e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_1923  formate dehydrogenase family accessory protein FdhD  35.83 
 
 		 280 aa  122  6e-27  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A1126  formate dehydrogenase accessory protein  32.05 
 
 		 337 aa  120  3e-26  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_2130  formate dehydrogenase family accessory protein FdhD  35.07 
 
 		 283 aa  119  4.9999999999999996e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  0.455912  normal  0.581272 
 
 
-
 
NC_013173  Dbac_1058  formate dehydrogenase family accessory protein FdhD  33.05 
 
 		 264 aa  118  7e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_2010  formate dehydrogenase family accessory protein FdhD  31.91 
 
 		 248 aa  117  9.999999999999999e-26  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.068526  n/a   
 
 
-
 
NC_011830  Dhaf_1033  formate dehydrogenase family accessory protein FdhD  30.77 
 
 		 266 aa  117  9.999999999999999e-26  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0364714  n/a   
 
 
-
 
NC_013510  Tcur_3534  formate dehydrogenase family accessory protein FdhD  33.73 
 
 		 284 aa  117  1.9999999999999998e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009802  CCC13826_0211  formate dehydrogenase accessory protein  28.97 
 
 		 260 aa  115  6e-25  Campylobacter concisus 13826  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_0466  formate dehydrogenase accessory protein  28.68 
 
 		 262 aa  115  6.9999999999999995e-25  Geobacillus sp. WCH70  Bacteria  normal  0.276769  n/a   
 
 
-
 
NC_009707  JJD26997_1860  formate dehydrogenase accessory protein  29.48 
 
 		 260 aa  115  6.9999999999999995e-25  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_2593  formate dehydrogenase accessory protein  33.2 
 
 		 278 aa  114  1.0000000000000001e-24  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009783  VIBHAR_02271  hypothetical protein  33.47 
 
 		 276 aa  113  3e-24  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_1325  formate dehydrogenase  33.98 
 
 		 282 aa  113  4.0000000000000004e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.201918 
 
 
-
 
NC_008148  Rxyl_0145  formate dehydrogenase family accessory protein FdhD  33.86 
 
 		 289 aa  112  4.0000000000000004e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B1639  formate dehydrogenase accessory protein  30.32 
 
 		 223 aa  112  4.0000000000000004e-24  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003912  CJE1681  formate dehydrogenase accessory protein  29.72 
 
 		 260 aa  112  5e-24  Campylobacter jejuni RM1221  Bacteria  normal  1  n/a   
 
 
-
 
NC_008787  CJJ81176_1500  formate dehydrogenase accessory protein  29.72 
 
 		 260 aa  112  5e-24  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.919736  n/a   
 
 
-
 
NC_009831  Ssed_4427  formate dehydrogenase, subunit FdhD  31.12 
 
 		 295 aa  112  6e-24  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_06930  formate dehydrogenase family accessory protein FdhD  29.54 
 
 		 297 aa  112  8.000000000000001e-24  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  0.215671 
 
 
-
 
NC_009438  Sputcn32_0343  formate dehydrogenase, subunit FdhD  32.91 
 
 		 298 aa  111  1.0000000000000001e-23  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00229888  n/a   
 
 
-
 
NC_009379  Pnuc_0648  formate dehydrogenase, subunit FdhD  31.58 
 
 		 276 aa  111  1.0000000000000001e-23  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008312  Tery_0406  formate dehydrogenase family accessory protein FdhD  29.01 
 
 		 284 aa  111  1.0000000000000001e-23  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_2451  formate dehydrogenase family accessory protein FdhD  32.32 
 
 		 281 aa  111  1.0000000000000001e-23  Eggerthella lenta DSM 2243  Bacteria  normal  0.0979035  normal  1 
 
 
-
 
NC_009665  Shew185_4100  formate dehydrogenase subunit FdhD  31.36 
 
 		 296 aa  110  2.0000000000000002e-23  Shewanella baltica OS185  Bacteria  normal  0.015822  n/a   
 
 
-
 
NC_009997  Sbal195_4218  formate dehydrogenase subunit FdhD  31.36 
 
 		 296 aa  110  2.0000000000000002e-23  Shewanella baltica OS195  Bacteria  normal  0.072328  normal  0.431807 
 
 
-
 
NC_009052  Sbal_4130  formate dehydrogenase subunit FdhD  31.36 
 
 		 296 aa  110  2.0000000000000002e-23  Shewanella baltica OS155  Bacteria  normal  0.142791  n/a   
 
 
-
 
NC_011886  Achl_3467  formate dehydrogenase family accessory protein FdhD  32.01 
 
 		 294 aa  110  2.0000000000000002e-23  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013517  Sterm_4115  formate dehydrogenase family accessory protein FdhD  28.02 
 
 		 255 aa  109  4.0000000000000004e-23  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.271618  n/a   
 
 
-
 
NC_011832  Mpal_1216  formate dehydrogenase family accessory protein FdhD  34.03 
 
 		 261 aa  109  4.0000000000000004e-23  Methanosphaerula palustris E1-9c  Archaea  normal  0.944709  normal  0.100536 
 
 
-
 
NC_010506  Swoo_4819  formate dehydrogenase subunit FdhD  30.12 
 
 		 298 aa  109  4.0000000000000004e-23  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_3714  formate dehydrogenase, subunit FdhD  31.49 
 
 		 298 aa  109  4.0000000000000004e-23  Shewanella sp. MR-4  Bacteria  normal  0.272943  normal  0.525322 
 
 
-
 
NC_008726  Mvan_4033  formate dehydrogenase accessory protein  28.52 
 
 		 287 aa  109  4.0000000000000004e-23  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.681532  normal  0.294632 
 
 
-
 
NC_011663  Sbal223_0239  formate dehydrogenase subunit FdhD  30.93 
 
 		 290 aa  109  5e-23  Shewanella baltica OS223  Bacteria  normal  1  hitchhiker  0.000144632 
 
 
-
 
NC_009621  Smed_5485  formate dehydrogenase family accessory protein FdhD  29.2 
 
 		 290 aa  108  6e-23  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009634  Mevan_0547  formate dehydrogenase family accessory protein FdhD  28.11 
 
 		 237 aa  108  7.000000000000001e-23  Methanococcus vannielii SB  Archaea  normal  1  n/a   
 
 
-
 
NC_013512  Sdel_2060  formate dehydrogenase family accessory protein FdhD  30.24 
 
 		 262 aa  108  7.000000000000001e-23  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.0000863556  n/a   
 
 
-
 
NC_008577  Shewana3_3910  formate dehydrogenase accessory protein FdhD, putative  31.06 
 
 		 298 aa  108  7.000000000000001e-23  Shewanella sp. ANA-3  Bacteria  normal  0.131875  normal  1 
 
 
-
 
NC_009092  Shew_0053  formate dehydrogenase, subunit FdhD  31.78 
 
 		 281 aa  108  8.000000000000001e-23  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_1914  formate dehydrogenase family accessory protein FdhD  34.2 
 
 		 285 aa  108  9.000000000000001e-23  Meiothermus ruber DSM 1279  Bacteria  normal  0.84446  hitchhiker  0.0000450272 
 
 
-
 
NC_011071  Smal_2149  formate dehydrogenase family accessory protein FdhD  31.58 
 
 		 282 aa  107  1e-22  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_3339  formate dehydrogenase family accessory protein FdhD  32.95 
 
 		 297 aa  107  1e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.224084 
 
 
-
 
NC_008322  Shewmr7_3785  formate dehydrogenase, subunit FdhD  31.49 
 
 		 298 aa  108  1e-22  Shewanella sp. MR-7  Bacteria  normal  0.0292467  normal  0.549187 
 
 
-
 
NC_009975  MmarC6_1440  formate dehydrogenase family accessory protein FdhD  28.4 
 
 		 233 aa  108  1e-22  Methanococcus maripaludis C6  Archaea  normal  1  n/a   
 
 
-
 
NC_004347  SO_4503  formate dehydrogenase accessory protein FdhD, putative  30.93 
 
 		 249 aa  107  2e-22  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007947  Mfla_0719  formate dehydrogenase family accessory protein FdhD  30.08 
 
 		 278 aa  107  2e-22  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013456  VEA_003500  formate dehydrogenase chain D  31.78 
 
 		 277 aa  107  2e-22  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009637  MmarC7_0479  formate dehydrogenase family accessory protein FdhD  28.81 
 
 		 233 aa  107  2e-22  Methanococcus maripaludis C7  Archaea  normal  0.161878  normal  1 
 
 
-
 
NC_003295  RSc2367  FDHD protein  30.77 
 
 		 291 aa  107  3e-22  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.0478854 
 
 
-
 
NC_013093  Amir_1157  formate dehydrogenase family accessory protein FdhD  31.33 
 
 		 274 aa  107  3e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_4473  formate dehydrogenase family accessory protein FdhD  29.55 
 
 		 276 aa  106  4e-22  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.979472  n/a   
 
 
-
 
NC_014158  Tpau_2346  formate dehydrogenase family accessory protein FdhD  32.41 
 
 		 284 aa  106  4e-22  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.36394  n/a   
 
 
-
 
NC_007908  Rfer_3256  formate dehydrogenase, subunit FdhD  32.08 
 
 		 280 aa  106  4e-22  Rhodoferax ferrireducens T118  Bacteria  normal  0.340615  n/a   
 
 
-
 
NC_014210  Ndas_4114  formate dehydrogenase family accessory protein FdhD  30.63 
 
 		 293 aa  106  4e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A1176  putative fdhD protein  33.05 
 
 		 299 aa  106  4e-22  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.108793 
 
 
-
 
NC_009077  Mjls_3577  formate dehydrogenase accessory protein  30.24 
 
 		 274 aa  105  6e-22  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009712  Mboo_2122  formate dehydrogenase family accessory protein FdhD  29.67 
 
 		 259 aa  105  6e-22  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.545765  normal  1 
 
 
-
 
NC_008146  Mmcs_3572  formate dehydrogenase accessory protein  30.24 
 
 		 274 aa  105  6e-22  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
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