| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2076 |
|---|
| Symbol | |
|---|
| ID | 3739527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2335777 |
|---|
| End bp | 2336568 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637779370 |
|---|
| Product | formate dehydrogenase, subunit FdhD |
|---|
| Protein accession | YP_385030 |
|---|
| Protein GI | 78223283 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 9.82479e-16 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGCA TTTACCACTA CGACAAAGGT AAACTGGCGG CAACGGAGAA GGAGTTCGTG
GGTGAGTTTC CGCTCCTCCT GAATGTCAAC GGTCGCGAGA TCGCCACTCT CATCGCCTCG
CCCCATGATC TCCGTTTTCT CGTCGCCGGA TTCCTGCGGT TGCAGGGGTT CGTGGAGAAA
GTGGAGGACT TCCAGCTTCT CTCGGTCTGC AACGATTTCG GCATTGCGCG GGTTCAGATC
AAGGGCGAAC TGCCCGAGAA GTTGAAGCCG GTCCTCACGT CGGGATGCGG CACCGGGATT
ACCTTCACGA TTCCGCAGGC CACGAAGGGA CGGTCCGACT CCCTGGCGGC CAGGCATTTC
TCGCCCGCGG CAGTATTCGC CATGATGGAA GAGCTGGCCA GGAAGGCGGA GGGGTACCGC
AGCCACGGCG GAATGCACTC GGCGGCGGTG GGGGACGGTT CCATCGTTCT CTACGCGGAG
GACCTGGGTC GGCACAACAC CCTGGACCGG ATAGCCGGGG AGGCGCTGTT GAGAGGGATA
GACCTGGCAG GCACGATGCT GGTCACGTCG GGGCGGGTCT CCACGGAGAT GGTGGCGAAA
TGCGTTCTTC TCGGCATTCA GCTCATTGCC TCCCGCACCT CTCCGACGGA TATGGCGGTC
AGGATGGCGG ATGAAGCGGG TATCACCATG ATCGGCTACG TTCGGGGCGG AAGGTTCGAG
CTCTATACCC ATCCCGAGCG ACTGCGGGTT GACTCGTTGG AGGAGGGATG TGCGTGTGCC
ACCGGCATAT AG
|
|---|
| Protein sequence | MKSIYHYDKG KLAATEKEFV GEFPLLLNVN GREIATLIAS PHDLRFLVAG FLRLQGFVEK
VEDFQLLSVC NDFGIARVQI KGELPEKLKP VLTSGCGTGI TFTIPQATKG RSDSLAARHF
SPAAVFAMME ELARKAEGYR SHGGMHSAAV GDGSIVLYAE DLGRHNTLDR IAGEALLRGI
DLAGTMLVTS GRVSTEMVAK CVLLGIQLIA SRTSPTDMAV RMADEAGITM IGYVRGGRFE
LYTHPERLRV DSLEEGCACA TGI
|
|---|
| |