More than 300 homologs were found in PanDaTox collection
for query gene Gmet_1062 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009483  Gura_3370  formate dehydrogenase family accessory protein FdhD  76.11 
 
 
487 aa  720    Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0780  formate dehydrogenase accessory protein FdhD  80.13 
 
 
478 aa  756    Geobacter sulfurreducens PCA  Bacteria  normal  0.162723  n/a   
 
 
-
 
NC_007517  Gmet_1062  formate dehydrogenase, subunit FdhD  100 
 
 
479 aa  969    Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0656292 
 
 
-
 
NC_009483  Gura_3385  formate dehydrogenase family accessory protein FdhD  72.44 
 
 
483 aa  673    Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2264  formate dehydrogenase family accessory protein FdhD  59.53 
 
 
468 aa  552  1e-156  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1958  formate dehydrogenase family accessory protein FdhD  59.01 
 
 
468 aa  550  1e-155  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_2076  formate dehydrogenase, subunit FdhD  68.8 
 
 
263 aa  344  2e-93  Geobacter metallireducens GS-15  Bacteria  hitchhiker  9.82479e-16  normal 
 
 
-
 
NC_012918  GM21_2990  formate dehydrogenase family accessory protein FdhD  64.29 
 
 
255 aa  314  2.9999999999999996e-84  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.68227e-19 
 
 
-
 
NC_012918  GM21_2817  formate dehydrogenase family accessory protein FdhD  60.78 
 
 
255 aa  310  2.9999999999999997e-83  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1293  formate dehydrogenase family accessory protein FdhD  62.95 
 
 
255 aa  309  6.999999999999999e-83  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0000222407  n/a   
 
 
-
 
NC_011146  Gbem_1437  formate dehydrogenase family accessory protein FdhD  58.82 
 
 
255 aa  304  2.0000000000000002e-81  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1571  formate dehydrogenase family accessory protein FdhD  65.28 
 
 
224 aa  259  8e-68  Geobacter bemidjiensis Bem  Bacteria  normal  0.915913  n/a   
 
 
-
 
NC_012918  GM21_2642  formate dehydrogenase family accessory protein FdhD  65.28 
 
 
235 aa  258  2e-67  Geobacter sp. M21  Bacteria  n/a    normal  0.0395986 
 
 
-
 
NC_008609  Ppro_3519  formate dehydrogenase accessory protein FdhD  55.84 
 
 
229 aa  231  2e-59  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0989  formate dehydrogenase family accessory protein FdhD  39.83 
 
 
266 aa  179  9e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_2175  formate dehydrogenase family accessory protein FdhD  33.73 
 
 
260 aa  154  2.9999999999999998e-36  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.145342 
 
 
-
 
NC_011773  BCAH820_3578  formate dehydrogenase accessory protein  33.73 
 
 
265 aa  152  8.999999999999999e-36  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS3364  formate dehydrogenase accessory protein  33.2 
 
 
265 aa  151  2e-35  Bacillus anthracis str. Sterne  Bacteria  normal  0.144836  n/a   
 
 
-
 
NC_007530  GBAA_3628  formate dehydrogenase accessory protein  33.2 
 
 
265 aa  151  2e-35  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3328  formate dehydrogenase accessory protein  33.2 
 
 
265 aa  150  4e-35  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0183588  n/a   
 
 
-
 
NC_011725  BCB4264_A3678  formate dehydrogenase accessory protein  33.6 
 
 
265 aa  150  5e-35  Bacillus cereus B4264  Bacteria  normal  0.688402  n/a   
 
 
-
 
NC_013525  Tter_1466  molybdopterin-guanine dinucleotide biosynthesis protein A-like protein  42.7 
 
 
202 aa  149  1.0000000000000001e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_2174  molybdenum cofactor guanylyltransferase  43.09 
 
 
198 aa  148  3e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.881016  normal  0.0453218 
 
 
-
 
NC_007498  Pcar_1840  formate dehydrogenase accessory protein  33.07 
 
 
268 aa  147  4.0000000000000006e-34  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00380429  n/a   
 
 
-
 
NC_009632  SaurJH1_2347  formate dehydrogenase accessory protein  31.45 
 
 
265 aa  147  4.0000000000000006e-34  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2305  formate dehydrogenase accessory protein  31.45 
 
 
265 aa  147  4.0000000000000006e-34  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3278  formate dehydrogenase accessory protein  32.4 
 
 
265 aa  147  5e-34  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1343  formate dehydrogenase accessory protein  33.47 
 
 
263 aa  146  9e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_3585  formate dehydrogenase accessory protein  32.4 
 
 
265 aa  145  2e-33  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3595  formate dehydrogenase accessory protein  32.4 
 
 
265 aa  145  2e-33  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1205  formate dehydrogenase family accessory protein FdhD  34.69 
 
 
303 aa  145  2e-33  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.495294 
 
 
-
 
NC_013216  Dtox_3374  formate dehydrogenase family accessory protein FdhD  34.13 
 
 
260 aa  142  1.9999999999999998e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1923  formate dehydrogenase family accessory protein FdhD  35.88 
 
 
280 aa  141  3e-32  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0466  formate dehydrogenase accessory protein  31.87 
 
 
262 aa  141  3e-32  Geobacillus sp. WCH70  Bacteria  normal  0.276769  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0501  formate dehydrogenase accessory protein  31.1 
 
 
268 aa  140  7e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4711  formate dehydrogenase accessory protein  31.89 
 
 
268 aa  139  1e-31  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0626  formate dehydrogenase accessory protein  31.89 
 
 
268 aa  137  4e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0654  formate dehydrogenase accessory protein  32.16 
 
 
268 aa  137  6.0000000000000005e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0715  formate dehydrogenase accessory protein  32.16 
 
 
268 aa  137  6.0000000000000005e-31  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1216  formate dehydrogenase family accessory protein FdhD  34.68 
 
 
261 aa  137  6.0000000000000005e-31  Methanosphaerula palustris E1-9c  Archaea  normal  0.944709  normal  0.100536 
 
 
-
 
NC_008346  Swol_1030  formate dehydrogenase accessory protein  33.99 
 
 
263 aa  136  7.000000000000001e-31  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0644  formate dehydrogenase accessory protein  31.89 
 
 
268 aa  135  1.9999999999999998e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS0556  formate dehydrogenase accessory protein  31.89 
 
 
268 aa  135  1.9999999999999998e-30  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0498  formate dehydrogenase accessory protein  31.89 
 
 
268 aa  135  1.9999999999999998e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0500  formate dehydrogenase accessory protein  31.89 
 
 
268 aa  134  1.9999999999999998e-30  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0588  formate dehydrogenase accessory protein  31.89 
 
 
268 aa  135  1.9999999999999998e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1097  molybdopterin-guanine dinucleotide biosynthesis protein A-like protein  37.37 
 
 
205 aa  135  1.9999999999999998e-30  Geobacter sp. M21  Bacteria  n/a    normal  0.630746 
 
 
-
 
NC_009674  Bcer98_0504  formate dehydrogenase accessory protein  30.8 
 
 
269 aa  135  1.9999999999999998e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1157  molybdopterin-guanine dinucleotide biosynthesis protein A-like protein  37.82 
 
 
197 aa  135  1.9999999999999998e-30  Geobacter lovleyi SZ  Bacteria  normal  0.0340389  n/a   
 
 
-
 
NC_010718  Nther_2277  formate dehydrogenase family accessory protein FdhD  33.9 
 
 
258 aa  134  3e-30  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.181166  normal 
 
 
-
 
NC_007517  Gmet_0300  putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB  37.24 
 
 
392 aa  132  1.0000000000000001e-29  Geobacter metallireducens GS-15  Bacteria  normal  0.384307  normal 
 
 
-
 
NC_009253  Dred_2876  formate dehydrogenase family accessory protein FdhD  32.35 
 
 
262 aa  131  2.0000000000000002e-29  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0487293  n/a   
 
 
-
 
NC_011146  Gbem_3162  molybdopterin-guanine dinucleotide biosynthesis protein A-like protein  36.84 
 
 
205 aa  130  4.0000000000000003e-29  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0654  putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB  39.47 
 
 
347 aa  130  6e-29  Ammonifex degensii KC4  Bacteria  normal  0.425829  n/a   
 
 
-
 
NC_003295  RSc2367  FDHD protein  31.01 
 
 
291 aa  129  1.0000000000000001e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0478854 
 
 
-
 
NC_009712  Mboo_2122  formate dehydrogenase family accessory protein FdhD  33.47 
 
 
259 aa  129  1.0000000000000001e-28  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.545765  normal 
 
 
-
 
NC_008825  Mpe_A1176  putative fdhD protein  32.44 
 
 
299 aa  129  2.0000000000000002e-28  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.108793 
 
 
-
 
NC_013173  Dbac_1058  formate dehydrogenase family accessory protein FdhD  32.55 
 
 
264 aa  128  2.0000000000000002e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0464  molybdopterin-guanine dinucleotide biosynthesis protein A-like protein  36.9 
 
 
198 aa  128  3e-28  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1111  molybdopterin-guanine dinucleotide biosynthesis protein A  36.61 
 
 
195 aa  128  3e-28  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_06930  formate dehydrogenase family accessory protein FdhD  30.74 
 
 
297 aa  128  3e-28  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.215671 
 
 
-
 
NC_008781  Pnap_0839  formate dehydrogenase, subunit FdhD  30.83 
 
 
290 aa  127  4.0000000000000003e-28  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.145713  normal 
 
 
-
 
NC_008261  CPF_2047  molybdopterin-guanine dinucleotide biosynthesis protein  35.11 
 
 
198 aa  127  6e-28  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_3175  molybdopterin-guanine dinucleotide biosynthesis protein A  34.76 
 
 
202 aa  125  1e-27  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.231435  n/a   
 
 
-
 
NC_010814  Glov_0909  molybdopterin-guanine dinucleotide biosynthesis protein A-like protein  37.7 
 
 
195 aa  125  2e-27  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1598  molybdopterin-guanine dinucleotide biosynthesis protein A  33.33 
 
 
188 aa  125  2e-27  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3467  formate dehydrogenase family accessory protein FdhD  34.07 
 
 
294 aa  125  2e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_3723  formate dehydrogenase family accessory protein FdhD  31.33 
 
 
303 aa  124  3e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.521477 
 
 
-
 
NC_011772  BCG9842_B1639  formate dehydrogenase accessory protein  32.73 
 
 
223 aa  124  3e-27  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_1762  molybdopterin-guanine dinucleotide biosynthesis protein-like protein  33.51 
 
 
198 aa  124  3e-27  Clostridium perfringens SM101  Bacteria  normal  0.839187  n/a   
 
 
-
 
NC_011726  PCC8801_0758  formate dehydrogenase family accessory protein FdhD  29.92 
 
 
299 aa  124  4e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010717  PXO_00469  formate dehydrogenase accessory protein  30.08 
 
 
273 aa  124  4e-27  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_013161  Cyan8802_0784  formate dehydrogenase family accessory protein FdhD  29.55 
 
 
299 aa  124  5e-27  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1909  formate dehydrogenase, subunit FdhD  31.32 
 
 
300 aa  124  5e-27  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2176  formate dehydrogenase subunit FdhD  31.15 
 
 
291 aa  123  9e-27  Ralstonia pickettii 12D  Bacteria  normal  0.60851  normal  0.0520829 
 
 
-
 
NC_013512  Sdel_2060  formate dehydrogenase family accessory protein FdhD  30 
 
 
262 aa  122  9.999999999999999e-27  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.0000863556  n/a   
 
 
-
 
NC_010718  Nther_1264  formate dehydrogenase family accessory protein FdhD  34.36 
 
 
205 aa  122  9.999999999999999e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.407765  normal 
 
 
-
 
NC_011830  Dhaf_1033  formate dehydrogenase family accessory protein FdhD  30.77 
 
 
266 aa  121  1.9999999999999998e-26  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0364714  n/a   
 
 
-
 
NC_007908  Rfer_3256  formate dehydrogenase, subunit FdhD  31.25 
 
 
280 aa  122  1.9999999999999998e-26  Rhodoferax ferrireducens T118  Bacteria  normal  0.340615  n/a   
 
 
-
 
NC_007498  Pcar_1839  molybdopterin-guanine dinucleotide biosynthesis protein A  35.98 
 
 
210 aa  121  3e-26  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000213154  n/a   
 
 
-
 
NC_010682  Rpic_2580  formate dehydrogenase subunit FdhD  30.2 
 
 
291 aa  121  3e-26  Ralstonia pickettii 12J  Bacteria  normal  0.437396  normal  0.264505 
 
 
-
 
NC_014212  Mesil_2130  formate dehydrogenase family accessory protein FdhD  33.88 
 
 
283 aa  121  3e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  0.455912  normal  0.581272 
 
 
-
 
NC_008322  Shewmr7_3785  formate dehydrogenase, subunit FdhD  29.49 
 
 
298 aa  120  3.9999999999999996e-26  Shewanella sp. MR-7  Bacteria  normal  0.0292467  normal  0.549187 
 
 
-
 
NC_009092  Shew_0053  formate dehydrogenase, subunit FdhD  29.72 
 
 
281 aa  120  3.9999999999999996e-26  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4503  formate dehydrogenase accessory protein FdhD, putative  29.41 
 
 
249 aa  120  4.9999999999999996e-26  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009621  Smed_5485  formate dehydrogenase family accessory protein FdhD  32.37 
 
 
290 aa  120  4.9999999999999996e-26  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1126  formate dehydrogenase accessory protein  29.84 
 
 
337 aa  120  4.9999999999999996e-26  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_3282  putative formate dehydrogenase accessory protein FdhD  33.33 
 
 
294 aa  120  6e-26  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.610509  normal 
 
 
-
 
NC_009831  Ssed_4427  formate dehydrogenase, subunit FdhD  28.74 
 
 
295 aa  120  7e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_2204  formate dehydrogenase family accessory protein FdhD  33.47 
 
 
254 aa  119  9e-26  Methanospirillum hungatei JF-1  Archaea  normal  0.154366  normal  0.450296 
 
 
-
 
NC_008321  Shewmr4_3714  formate dehydrogenase, subunit FdhD  29.49 
 
 
298 aa  119  9e-26  Shewanella sp. MR-4  Bacteria  normal  0.272943  normal  0.525322 
 
 
-
 
NC_010424  Daud_0985  putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB  36.36 
 
 
374 aa  119  9.999999999999999e-26  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3075  molybdopterin-guanine dinucleotide biosynthesis protein A  36.7 
 
 
191 aa  119  9.999999999999999e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0147556  unclonable  0.00000746757 
 
 
-
 
NC_008700  Sama_3619  formate dehydrogenase accessory protein FdhD, putative  30.2 
 
 
282 aa  119  9.999999999999999e-26  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3910  formate dehydrogenase accessory protein FdhD, putative  29.06 
 
 
298 aa  119  1.9999999999999998e-25  Shewanella sp. ANA-3  Bacteria  normal  0.131875  normal 
 
 
-
 
NC_011992  Dtpsy_2786  formate dehydrogenase subunit FdhD  28.52 
 
 
296 aa  118  3e-25  Acidovorax ebreus TPSY  Bacteria  normal  0.0374953  n/a   
 
 
-
 
NC_008312  Tery_0406  formate dehydrogenase family accessory protein FdhD  28.41 
 
 
284 aa  117  3e-25  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4819  formate dehydrogenase subunit FdhD  28.35 
 
 
298 aa  117  5e-25  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1399  molybdopterin-guanine dinucleotide biosynthesis protein A  33.67 
 
 
207 aa  117  5e-25  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0942  formate dehydrogenase, subunit FdhD  29.03 
 
 
319 aa  117  5e-25  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
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