| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02271 |
|---|
| Symbol | |
|---|
| ID | 5555253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2270759 |
|---|
| End bp | 2271589 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640907757 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001445460 |
|---|
| Protein GI | 156974553 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGG TAAAACCAAA CATTATTAAA ACCAGTGAAA ATCCCCTACA GACCATCGAA
GTAGAAGTGT TTGACGAATA CGGTGAGAGG CTGACTAAGC AAATCGCCTG TGAGCGCCCT
CTTACGGTGA TGTTGAACTG GAAGGAAGTC GTTACGCTAA TGACGCTTGG CTCTCGTCCT
GAAGCGCTTG TGTTGGGTTA TTTAAAGAAC CAGAGCTTCT TGTCTGATCC TGAAGCGATT
GAATCTGTCA TTATTGACTG GGAAACGCAC TCAGCTGCGG TTATCACCAA AGAAAATACT
GAGCACTTAG AAGGCGCGCT AAAGAAGAAG ACGGTGACGT CTGGCTGTGG TCAGGGCACT
ATGTACGGCA ACGTGATGAA GCAGCTTGAA GATTACCAAG TGCCACAAGT GCCGCTGAAG
CAATCTGAAA TCTACGCGGC GCTTGAAGCG TTGACGCATT ACAACGATAC CTACAAAAAA
GCGGGTGCTG TGCATGGCTG TGCCGTTTGT AAAGGTGACG AAGTACTGTC TTTTGTGGAA
GATGTTGGTC GTCACAACGC AGTTGATACG CTTGCGGGTG AAATGTGGCT TAACCAAGAA
ACGGGTGAAG ATAAAGTTTT CTACACAACT GGTCGCCTTA CATCAGAGAT GGTGATTAAA
GTGGCGCAGA TGGGTATCCC TGTTTTGCTT TCTCGTTCAG GCGTAACTCA AATGGGTTTG
GATCTGGCGA AAAAGTTTGG CATTACGACT ATCGCTCGTG CGAAAGGCTT ACGCTTCCAA
GTCTTTACTG GTGCAGAGAA GATTGATTTT GACGTGAAAG GCAATCACTA A
|
|---|
| Protein sequence | MTVVKPNIIK TSENPLQTIE VEVFDEYGER LTKQIACERP LTVMLNWKEV VTLMTLGSRP
EALVLGYLKN QSFLSDPEAI ESVIIDWETH SAAVITKENT EHLEGALKKK TVTSGCGQGT
MYGNVMKQLE DYQVPQVPLK QSEIYAALEA LTHYNDTYKK AGAVHGCAVC KGDEVLSFVE
DVGRHNAVDT LAGEMWLNQE TGEDKVFYTT GRLTSEMVIK VAQMGIPVLL SRSGVTQMGL
DLAKKFGITT IARAKGLRFQ VFTGAEKIDF DVKGNH
|
|---|
| |