| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1033 |
|---|
| Symbol | |
|---|
| ID | 7258001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1129865 |
|---|
| End bp | 1130665 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643560947 |
|---|
| Product | formate dehydrogenase family accessory protein FdhD |
|---|
| Protein accession | YP_002457529 |
|---|
| Protein GI | 219667094 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0364714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCC ATTTAGCTAG CACTACAGAA ACTCAGGTCA TCAAAATTAT AGGAACCGAT
AAAGAAGTGG TCAAAGAACT GGTTGCCATC GAAAAGGCCC TCACAGTCTT TATTAATGGT
AAAGAATTTG CGACCATGGT TTGTACGCCC ACTCAAGAGA AGGAATTGGT CATAGGCTTT
CTCGGTTCAG AAGGGATCAT CGAAGATCCT GATCAGATAA AGAAGATTAC CTTGGATAAA
AGGGAAGGAC TTGTGTGGGT GGAAACGTCA GTGGAACAAA CCCTTAGTGA AGACCTTTTT
CTGAAACGTT ATCTCACTTC TTGCTGTGGC AAAGGGAAAA GTGCTTTTTA TTTTGCTAAT
GATGCCCGAT TGGCTCAGAA AGTAGAGAGC CGGCACACCA TTACCGCCCA GGAAGTCAGC
CACTATATCA ATTTGTTGGA AGACAATTCG GAACTGTTTC ATCTTACCGG AGGAGTTCAT
GGGGGGGCTT TAGCTTCCCA AGGTTCCTTG GATTATTGTG CCGTGGATAT CGGCAGGCAC
AATGTCCTGG ATAAATTGTA TGGACATGCT TTTCTCAATG GAACGGATAT TTCCCAAAAA
GTAATTGTCT TTAGTGGCCG GATTTCTTCG GAGATCCTGA TCAAGGCAGC CAAGATGGGC
TGCCCTATCC TCATTGGGGT ATCAGCCCCT ACCGATCTGG CCCTTAAGCT TGCGGAGGAA
CTGGGAGTCA CTGTGCTCGG ATTTGTCCGG GAAAACCGCA TGAATATCTA CACTCACTCT
GAGCGGATTA AAGGCTGTTA A
|
|---|
| Protein sequence | MSGHLASTTE TQVIKIIGTD KEVVKELVAI EKALTVFING KEFATMVCTP TQEKELVIGF
LGSEGIIEDP DQIKKITLDK REGLVWVETS VEQTLSEDLF LKRYLTSCCG KGKSAFYFAN
DARLAQKVES RHTITAQEVS HYINLLEDNS ELFHLTGGVH GGALASQGSL DYCAVDIGRH
NVLDKLYGHA FLNGTDISQK VIVFSGRISS EILIKAAKMG CPILIGVSAP TDLALKLAEE
LGVTVLGFVR ENRMNIYTHS ERIKGC
|
|---|
| |