More than 300 homologs were found in PanDaTox collection
for query gene GM21_2990 on replicon NC_012918
Organism: Geobacter sp. M21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_2990  formate dehydrogenase family accessory protein FdhD  100 
 
 
255 aa  512  1e-144  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.68227e-19 
 
 
-
 
NC_011146  Gbem_1293  formate dehydrogenase family accessory protein FdhD  89.41 
 
 
255 aa  463  1e-129  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0000222407  n/a   
 
 
-
 
NC_009483  Gura_3385  formate dehydrogenase family accessory protein FdhD  62.85 
 
 
483 aa  324  7e-88  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3370  formate dehydrogenase family accessory protein FdhD  63.32 
 
 
487 aa  319  3e-86  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1062  formate dehydrogenase, subunit FdhD  64.29 
 
 
479 aa  314  9.999999999999999e-85  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0656292 
 
 
-
 
NC_002939  GSU0780  formate dehydrogenase accessory protein FdhD  62.75 
 
 
478 aa  306  2.0000000000000002e-82  Geobacter sulfurreducens PCA  Bacteria  normal  0.162723  n/a   
 
 
-
 
NC_007517  Gmet_2076  formate dehydrogenase, subunit FdhD  60.32 
 
 
263 aa  305  3e-82  Geobacter metallireducens GS-15  Bacteria  hitchhiker  9.82479e-16  normal 
 
 
-
 
NC_012918  GM21_2817  formate dehydrogenase family accessory protein FdhD  55.38 
 
 
255 aa  280  2e-74  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_1958  formate dehydrogenase family accessory protein FdhD  56.05 
 
 
468 aa  277  1e-73  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2264  formate dehydrogenase family accessory protein FdhD  56.05 
 
 
468 aa  277  1e-73  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1437  formate dehydrogenase family accessory protein FdhD  53.2 
 
 
255 aa  274  8e-73  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0989  formate dehydrogenase family accessory protein FdhD  40 
 
 
266 aa  177  2e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_2175  formate dehydrogenase family accessory protein FdhD  35.51 
 
 
260 aa  152  5.9999999999999996e-36  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.145342 
 
 
-
 
NC_009632  SaurJH1_2347  formate dehydrogenase accessory protein  31.6 
 
 
265 aa  145  7.0000000000000006e-34  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2305  formate dehydrogenase accessory protein  31.6 
 
 
265 aa  145  7.0000000000000006e-34  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3578  formate dehydrogenase accessory protein  30.47 
 
 
265 aa  144  1e-33  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009253  Dred_2876  formate dehydrogenase family accessory protein FdhD  33.33 
 
 
262 aa  142  4e-33  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0487293  n/a   
 
 
-
 
NC_011725  BCB4264_A3678  formate dehydrogenase accessory protein  30.08 
 
 
265 aa  142  4e-33  Bacillus cereus B4264  Bacteria  normal  0.688402  n/a   
 
 
-
 
NC_005945  BAS3364  formate dehydrogenase accessory protein  30.08 
 
 
265 aa  142  7e-33  Bacillus anthracis str. Sterne  Bacteria  normal  0.144836  n/a   
 
 
-
 
NC_007530  GBAA_3628  formate dehydrogenase accessory protein  30.08 
 
 
265 aa  142  7e-33  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3585  formate dehydrogenase accessory protein  29.69 
 
 
265 aa  140  9.999999999999999e-33  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3328  formate dehydrogenase accessory protein  30.08 
 
 
265 aa  141  9.999999999999999e-33  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0183588  n/a   
 
 
-
 
NC_013411  GYMC61_1343  formate dehydrogenase accessory protein  32.81 
 
 
263 aa  140  1.9999999999999998e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011658  BCAH187_A3595  formate dehydrogenase accessory protein  29.69 
 
 
265 aa  140  1.9999999999999998e-32  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3278  formate dehydrogenase accessory protein  29.69 
 
 
265 aa  139  3.9999999999999997e-32  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1030  formate dehydrogenase accessory protein  34.48 
 
 
263 aa  134  1.9999999999999998e-30  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1840  formate dehydrogenase accessory protein  31.23 
 
 
268 aa  130  1.0000000000000001e-29  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00380429  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0501  formate dehydrogenase accessory protein  28.29 
 
 
268 aa  130  2.0000000000000002e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0556  formate dehydrogenase accessory protein  29.48 
 
 
268 aa  130  2.0000000000000002e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0498  formate dehydrogenase accessory protein  29.48 
 
 
268 aa  130  2.0000000000000002e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4711  formate dehydrogenase accessory protein  29.08 
 
 
268 aa  130  2.0000000000000002e-29  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_0588  formate dehydrogenase accessory protein  29.48 
 
 
268 aa  130  2.0000000000000002e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0644  formate dehydrogenase accessory protein  29.48 
 
 
268 aa  130  2.0000000000000002e-29  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK0500  formate dehydrogenase accessory protein  29.48 
 
 
268 aa  129  4.0000000000000003e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0504  formate dehydrogenase accessory protein  29.13 
 
 
269 aa  129  5.0000000000000004e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0626  formate dehydrogenase accessory protein  29.08 
 
 
268 aa  128  7.000000000000001e-29  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0715  formate dehydrogenase accessory protein  29.48 
 
 
268 aa  128  7.000000000000001e-29  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1923  formate dehydrogenase family accessory protein FdhD  35.63 
 
 
280 aa  128  9.000000000000001e-29  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0654  formate dehydrogenase accessory protein  29.48 
 
 
268 aa  128  1.0000000000000001e-28  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2277  formate dehydrogenase family accessory protein FdhD  34.03 
 
 
258 aa  126  4.0000000000000003e-28  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.181166  normal 
 
 
-
 
NC_012793  GWCH70_0466  formate dehydrogenase accessory protein  28.74 
 
 
262 aa  122  4e-27  Geobacillus sp. WCH70  Bacteria  normal  0.276769  n/a   
 
 
-
 
NC_013216  Dtox_3374  formate dehydrogenase family accessory protein FdhD  30.68 
 
 
260 aa  120  9.999999999999999e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1205  formate dehydrogenase family accessory protein FdhD  33.47 
 
 
303 aa  121  9.999999999999999e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.495294 
 
 
-
 
NC_009457  VC0395_A1126  formate dehydrogenase accessory protein  32.5 
 
 
337 aa  119  3e-26  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0211  formate dehydrogenase accessory protein  30.16 
 
 
260 aa  118  9.999999999999999e-26  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2593  formate dehydrogenase accessory protein  32.02 
 
 
278 aa  116  3e-25  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0784  formate dehydrogenase family accessory protein FdhD  30.71 
 
 
299 aa  116  3.9999999999999997e-25  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_06930  formate dehydrogenase family accessory protein FdhD  30.58 
 
 
297 aa  116  3.9999999999999997e-25  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.215671 
 
 
-
 
NC_010424  Daud_2010  formate dehydrogenase family accessory protein FdhD  31.25 
 
 
248 aa  115  5e-25  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.068526  n/a   
 
 
-
 
NC_011886  Achl_3467  formate dehydrogenase family accessory protein FdhD  31.16 
 
 
294 aa  115  6e-25  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013510  Tcur_3534  formate dehydrogenase family accessory protein FdhD  33.59 
 
 
284 aa  115  7.999999999999999e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2367  FDHD protein  32.77 
 
 
291 aa  114  1.0000000000000001e-24  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0478854 
 
 
-
 
NC_013517  Sterm_4115  formate dehydrogenase family accessory protein FdhD  27.38 
 
 
255 aa  114  1.0000000000000001e-24  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.271618  n/a   
 
 
-
 
NC_009438  Sputcn32_0343  formate dehydrogenase, subunit FdhD  33.2 
 
 
298 aa  114  1.0000000000000001e-24  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00229888  n/a   
 
 
-
 
NC_009707  JJD26997_1860  formate dehydrogenase accessory protein  29.53 
 
 
260 aa  114  1.0000000000000001e-24  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2130  formate dehydrogenase family accessory protein FdhD  32.95 
 
 
283 aa  114  1.0000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  0.455912  normal  0.581272 
 
 
-
 
NC_010682  Rpic_2580  formate dehydrogenase subunit FdhD  33.19 
 
 
291 aa  114  2.0000000000000002e-24  Ralstonia pickettii 12J  Bacteria  normal  0.437396  normal  0.264505 
 
 
-
 
NC_011726  PCC8801_0758  formate dehydrogenase family accessory protein FdhD  30.31 
 
 
299 aa  114  2.0000000000000002e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_0406  formate dehydrogenase family accessory protein FdhD  29.06 
 
 
284 aa  114  2.0000000000000002e-24  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4033  formate dehydrogenase accessory protein  29.14 
 
 
287 aa  114  2.0000000000000002e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.681532  normal  0.294632 
 
 
-
 
NC_011772  BCG9842_B1639  formate dehydrogenase accessory protein  28.96 
 
 
223 aa  113  3e-24  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2176  formate dehydrogenase subunit FdhD  33.19 
 
 
291 aa  113  3e-24  Ralstonia pickettii 12D  Bacteria  normal  0.60851  normal  0.0520829 
 
 
-
 
NC_013204  Elen_2451  formate dehydrogenase family accessory protein FdhD  33.58 
 
 
281 aa  113  3e-24  Eggerthella lenta DSM 2243  Bacteria  normal  0.0979035  normal 
 
 
-
 
NC_013512  Sdel_2060  formate dehydrogenase family accessory protein FdhD  30.77 
 
 
262 aa  113  4.0000000000000004e-24  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.0000863556  n/a   
 
 
-
 
NC_010506  Swoo_4819  formate dehydrogenase subunit FdhD  31.08 
 
 
298 aa  112  5e-24  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4427  formate dehydrogenase, subunit FdhD  31.2 
 
 
295 aa  112  6e-24  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4100  formate dehydrogenase subunit FdhD  31.67 
 
 
296 aa  112  8.000000000000001e-24  Shewanella baltica OS185  Bacteria  normal  0.015822  n/a   
 
 
-
 
NC_008148  Rxyl_0145  formate dehydrogenase family accessory protein FdhD  32.54 
 
 
289 aa  112  8.000000000000001e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4218  formate dehydrogenase subunit FdhD  31.67 
 
 
296 aa  112  8.000000000000001e-24  Shewanella baltica OS195  Bacteria  normal  0.072328  normal  0.431807 
 
 
-
 
NC_008322  Shewmr7_3785  formate dehydrogenase, subunit FdhD  30.77 
 
 
298 aa  112  8.000000000000001e-24  Shewanella sp. MR-7  Bacteria  normal  0.0292467  normal  0.549187 
 
 
-
 
NC_009052  Sbal_4130  formate dehydrogenase subunit FdhD  31.67 
 
 
296 aa  112  8.000000000000001e-24  Shewanella baltica OS155  Bacteria  normal  0.142791  n/a   
 
 
-
 
NC_009379  Pnuc_0648  formate dehydrogenase, subunit FdhD  32.35 
 
 
276 aa  111  1.0000000000000001e-23  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4503  formate dehydrogenase accessory protein FdhD, putative  31.67 
 
 
249 aa  111  1.0000000000000001e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008787  CJJ81176_1500  formate dehydrogenase accessory protein  29.53 
 
 
260 aa  111  1.0000000000000001e-23  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.919736  n/a   
 
 
-
 
NC_013441  Gbro_3682  formate dehydrogenase subunit FdhD  32.57 
 
 
279 aa  111  1.0000000000000001e-23  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1681  formate dehydrogenase accessory protein  29.53 
 
 
260 aa  110  2.0000000000000002e-23  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0239  formate dehydrogenase subunit FdhD  31.25 
 
 
290 aa  110  2.0000000000000002e-23  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000144632 
 
 
-
 
NC_008321  Shewmr4_3714  formate dehydrogenase, subunit FdhD  30.77 
 
 
298 aa  110  2.0000000000000002e-23  Shewanella sp. MR-4  Bacteria  normal  0.272943  normal  0.525322 
 
 
-
 
NC_008825  Mpe_A1176  putative fdhD protein  34.16 
 
 
299 aa  110  3e-23  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.108793 
 
 
-
 
NC_008577  Shewana3_3910  formate dehydrogenase accessory protein FdhD, putative  30.36 
 
 
298 aa  110  3e-23  Shewanella sp. ANA-3  Bacteria  normal  0.131875  normal 
 
 
-
 
NC_009051  Memar_1911  formate dehydrogenase family accessory protein FdhD  31.76 
 
 
249 aa  109  4.0000000000000004e-23  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009621  Smed_5485  formate dehydrogenase family accessory protein FdhD  30 
 
 
290 aa  109  4.0000000000000004e-23  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0053  formate dehydrogenase, subunit FdhD  31.87 
 
 
281 aa  109  5e-23  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3577  formate dehydrogenase accessory protein  29.43 
 
 
274 aa  109  5e-23  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3572  formate dehydrogenase accessory protein  29.43 
 
 
274 aa  109  5e-23  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_2122  formate dehydrogenase family accessory protein FdhD  30.61 
 
 
259 aa  109  5e-23  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.545765  normal 
 
 
-
 
NC_008705  Mkms_3645  formate dehydrogenase accessory protein  29.43 
 
 
274 aa  109  5e-23  Mycobacterium sp. KMS  Bacteria  normal  normal  0.259742 
 
 
-
 
NC_011830  Dhaf_1033  formate dehydrogenase family accessory protein FdhD  28.27 
 
 
266 aa  108  6e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0364714  n/a   
 
 
-
 
NC_013173  Dbac_1058  formate dehydrogenase family accessory protein FdhD  31.36 
 
 
264 aa  108  1e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_1320  formate dehydrogenase family accessory protein FdhD  28.85 
 
 
254 aa  107  1e-22  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_009901  Spea_4143  formate dehydrogenase subunit FdhD  30.33 
 
 
280 aa  107  1e-22  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1216  formate dehydrogenase family accessory protein FdhD  33.61 
 
 
261 aa  107  3e-22  Methanosphaerula palustris E1-9c  Archaea  normal  0.944709  normal  0.100536 
 
 
-
 
NC_007796  Mhun_2204  formate dehydrogenase family accessory protein FdhD  30.08 
 
 
254 aa  106  3e-22  Methanospirillum hungatei JF-1  Archaea  normal  0.154366  normal  0.450296 
 
 
-
 
NC_007963  Csal_1909  formate dehydrogenase, subunit FdhD  32.55 
 
 
300 aa  106  3e-22  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0051  formate dehydrogenase, subunit FdhD  31.22 
 
 
284 aa  106  3e-22  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3715  formate dehydrogenase subunit FdhD  30.4 
 
 
275 aa  106  3e-22  Thauera sp. MZ1T  Bacteria  normal  0.351414  n/a   
 
 
-
 
NC_009783  VIBHAR_02271  hypothetical protein  30.58 
 
 
276 aa  106  4e-22  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007908  Rfer_3256  formate dehydrogenase, subunit FdhD  31.02 
 
 
280 aa  106  4e-22  Rhodoferax ferrireducens T118  Bacteria  normal  0.340615  n/a   
 
 
-
 
NC_014158  Tpau_2346  formate dehydrogenase family accessory protein FdhD  31.89 
 
 
284 aa  106  4e-22  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.36394  n/a   
 
 
-
 
NC_008043  TM1040_3756  formate dehydrogenase family accessory protein FdhD  33.2 
 
 
293 aa  106  4e-22  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
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