Gene Sfum_1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1205 
Symbol 
ID4460630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1491575 
End bp1492486 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content61% 
IMG OID639701972 
Productformate dehydrogenase family accessory protein FdhD 
Protein accessionYP_845333 
Protein GI116748646 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.495294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTCCGG GTTCGGGTTC GGACACGCAG GGCAAGGTTC AGGCAGGCGG AACGCAGTCC 
GGGGAAGGCG CCGCGCGGGA GGAAGTCGCT TCGGTTCCGG CCTGGGTCTT CGCCGGGGAT
GAGGGACCGG TCGAGCGGCG GCAGTGGGTA ATCAAGGAAC GCCCGGTCAC CCTCTACCTG
AACGGCGGGG AGATCGTCAC GCTCCTCTGT GCGGGGCATC ACCTCGATGA ACTGGCGGCG
GGGTTTTTCT ACGCGGAAGG ATTCATCGGG GTTCGGGAAG ACATTCTCCG ATTCGAAATC
GACGAATCGG CCGGAAAGGT GGATGTGATC ACCCGGGAGG TCTCGACCCC CGCAAATCGA
ATGTGGATGA AGAGAACCAT TACTTCGGGG TGCGGCAAAG GATCGTTGTT CTATTTTTCG
CTGGACGCCC TGCTCAGCAA ACCGGTTGAA AGCAGGCTCC GGGTCTCGCC GCGGCAGGTG
CAGGCGAGAA TCGAAGATTT GAATCGCTTG AGCGATACGT ATCGACGTAC ACATGGTGTC
CACAACACCA TTCTGGCCAC TCCGGACGAA GTGGTTCTTT TCAGGGATGA CATCGGCCGG
CACAATGCCG TGGACATGAT CATAGGCCAC GCGGTCCTGC ACGGTGTGCT CCTCGACGAT
AAAATGCTCG TCACGACCGG AAGGCTCACC TCGGAGATCC TGATCAAGAT CGCCAAGGTG
GGGATCCCCA TCCTTGTGAG CCGCAACACC GCCACGACCC TCGCCGTGGA GCTCGCCGAG
GCCCTGAATA TCACGCTCAT CGGCTATGCG CGGGCGGGCC GGTTTACACT TTACAGCGGC
CGGGACAGGG TCGCTGAGAA TCCACGGATG CAGCCGGGAA ACCCCGGGGA ATCGGGTCCC
GTGGAATCAT GA
 
Protein sequence
MIPGSGSDTQ GKVQAGGTQS GEGAAREEVA SVPAWVFAGD EGPVERRQWV IKERPVTLYL 
NGGEIVTLLC AGHHLDELAA GFFYAEGFIG VREDILRFEI DESAGKVDVI TREVSTPANR
MWMKRTITSG CGKGSLFYFS LDALLSKPVE SRLRVSPRQV QARIEDLNRL SDTYRRTHGV
HNTILATPDE VVLFRDDIGR HNAVDMIIGH AVLHGVLLDD KMLVTTGRLT SEILIKIAKV
GIPILVSRNT ATTLAVELAE ALNITLIGYA RAGRFTLYSG RDRVAENPRM QPGNPGESGP
VES