| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1062 |
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| Symbol | |
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| ID | 3739509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1182355 |
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| End bp | 1183794 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637778340 |
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| Product | formate dehydrogenase, subunit FdhD |
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| Protein accession | YP_384027 |
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| Protein GI | 78222280 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0746] Molybdopterin-guanine dinucleotide biosynthesis protein A
[COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.0656292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA TCCACATCTA CACCAACGGC CGTTTCGAAG AAAAACAGTC GGGCATCGTC
CGGGAATTCC CCCTGGTGCT CCACGTGAAC GGCCGGGAGA TCGCGACGCT GATCTCTTCT
CCCCACGATC TCCGGTTTCT CGTTGCAGGG TTCCTTCGCA ACCAGGGGTT CGTGGAGCGG
GCCGAGGATT TCCACATGCT GGCCGTCTGC GACGACTTCG GCATCGCCAA CGCGCGGATC
AGGGGCGAGC TGCCGGAGCG GCTGAAGCCG GTCCTCACCA GCGGCTGCGG CACGGGGGTC
ACCTTTACCC TGGAGACCCC GAAAATCCCT CCTCCCCTGG CCCTGCCTGC TATCACCACC
GACGCCGTGT TTCGCCTCAT GGAGGAGCTG GCGCGGCGGG CCGACAACTA CCGGAGCCAC
GGCGGCATCC ACTCCGCGGC CGTGGGGGAC GGGGAGGGGA ACCTCCTCCT CTTCGCCGAG
GACATCGGCC GCCACAACAC CCTTGACCGG ATCGCCGGCG AGGCCCTCTT CAAGGGGATC
GACCTGGCCG GGACAATCCT TGTCACCTCG GGGCGGGTCT CCACCGAAAT GGCTGCCAAG
TGCGCCAGGC TCGGAATAGC GCTCATCGCC TCCCGCACCT CCGCCACCGA CATGGCGGTG
AAGATGTGCG ACGAGGCGGG GATTCCCCTC ATCGGTTATG TCCGGGGAGG GAAGTTCACG
GTGTATGCCC ACCACGAGCG GCTGGCGATG GCGCCACCCG TGGGGGCGAT TCATGAACTG
CCCCTACCTG CGTCCGCACA GGGGAGGCGC ATTCCCGGCA TCACCGGCGT CATCCTCGCC
GGCGGGCAGT CGCGCCGCAT GGGGAGCAAC AAGGCGCTCC TTCCCTACAA GGGGGGGCGC
TTCATCGAGG CCATCCATCG GCAGCTGGCC GAGATCTTCG ACGAGGTGCT CCTCGTCACC
AACAACCCGG AGCAGTATGA TTTTCTCCCC TGCCGGAAAG TGGCCGACAT CCACCCGGGG
ATGGGGGCAC TGGCCGGCAT CCATGCGGGG CTGCACCACG CCGCCAACCC TGCCGCCTTC
ATGGTCGCCT GCGACATGCC GTACCTGAAC AGCGACCTGA TCCGGCATCT GGCCACCCTG
GCCGACCCGG GCGGGGTCCT CATTCCCGAA AGCCCGGCGG GGCTGGAACC GCTCCATGCG
GTCTACGGCA AAGGGTGCCT TGCCGCCATC GAGACAACGC TCCTGTCGGG CGAACGGCGG
ATTGTTTCGT TCTTCGGCCG GACCAACGTC AACCGGGTCA ACGCCGAGCA GGTGGCCCTC
TTCGATCCGG ACTACGCCAC CTTCAGCAAC ATCAATACCC CCGTGGACTA TTACCGGCTT
CGGGATGGCG AGCGGGACGA ACTCGACGCC GCTCTCGGCG CCGACCGCAT CGCGGGGTGA
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| Protein sequence | MKTIHIYTNG RFEEKQSGIV REFPLVLHVN GREIATLISS PHDLRFLVAG FLRNQGFVER
AEDFHMLAVC DDFGIANARI RGELPERLKP VLTSGCGTGV TFTLETPKIP PPLALPAITT
DAVFRLMEEL ARRADNYRSH GGIHSAAVGD GEGNLLLFAE DIGRHNTLDR IAGEALFKGI
DLAGTILVTS GRVSTEMAAK CARLGIALIA SRTSATDMAV KMCDEAGIPL IGYVRGGKFT
VYAHHERLAM APPVGAIHEL PLPASAQGRR IPGITGVILA GGQSRRMGSN KALLPYKGGR
FIEAIHRQLA EIFDEVLLVT NNPEQYDFLP CRKVADIHPG MGALAGIHAG LHHAANPAAF
MVACDMPYLN SDLIRHLATL ADPGGVLIPE SPAGLEPLHA VYGKGCLAAI ETTLLSGERR
IVSFFGRTNV NRVNAEQVAL FDPDYATFSN INTPVDYYRL RDGERDELDA ALGADRIAG
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