| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5485 |
|---|
| Symbol | |
|---|
| ID | 5319787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | + |
|---|
| Start bp | 451073 |
|---|
| End bp | 451945 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640777240 |
|---|
| Product | formate dehydrogenase family accessory protein FdhD |
|---|
| Protein accession | YP_001314172 |
|---|
| Protein GI | 150377577 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCTG ACTACATCAT AGGACCGAAC ACAGAGAATC CCCGGCTGAC GCGATCTGTC
ACGGGCGTGG ACCATCTTGG CGAAAAGCTC GAACTTTCGG TTATCGAGGA GCGGCCCCTT
ACCATCTACC TCAACTCGCA GGAGATCGTC ACAGCTATGA CGATCGGTGA CTACCCGGAA
TACTTGGCGC TCGGCTTCCT GCGCAATCAG GGGATGCTAG ATCCTGCAGA AACAGTTACC
GGTGTTGAAT ATGATGAGGA ACTGGACGTC GTCATTGTCC GCACCGAGAG CCGCACGACG
TACGAGGAAA AGGTCAAGAA GAAGACTCGC ACGAGTGGCT GTGCTGTAGG TACGGTGTTT
GGCGACATGA TGGAGGGCTT GGTGGGATTG ACCTTGCCGG CTGCGCCAAT GCGGACGTCG
TGGCTCTACA CGCTGGCCCG CACGATCAAC ACTACGCCGA GCCTGTATCT TAAAGCTGGC
GCGATCCATG GAACGGTGTT GTGCAAAGAG GACCGACCAC TAGTCTATAT GGAAGATGTC
GGTCGTCACA ACGCGGTCGA CAAGATCGCC GGCTGGATGC TCTTCGAGAA AGTGGGAGCT
GAAGACAAGA TTCTCTACAC CACCGGCCGG CTTACGTCCG AAATGGTTAT CAAGACTGCC
ATGATGGGGA TTCCGGTGCT CGCATCGCGC TCAGGCTTCA CGGCCTGGGG AGTCGAGATT
GCGCGCCAGG TAGGGCTGAC ATTGATTGGA CGCATGCGTG GTAAACGCTT CGTTTGTCTA
ACGGGGGAGG AGCGGCTGAT CTGGGATGCT GATCTCGAAA CCGTGCCTGA GGATGAGAAA
CATCACCGCC GCAAGGGCGC ACTGATTGAC TAG
|
|---|
| Protein sequence | MAADYIIGPN TENPRLTRSV TGVDHLGEKL ELSVIEERPL TIYLNSQEIV TAMTIGDYPE
YLALGFLRNQ GMLDPAETVT GVEYDEELDV VIVRTESRTT YEEKVKKKTR TSGCAVGTVF
GDMMEGLVGL TLPAAPMRTS WLYTLARTIN TTPSLYLKAG AIHGTVLCKE DRPLVYMEDV
GRHNAVDKIA GWMLFEKVGA EDKILYTTGR LTSEMVIKTA MMGIPVLASR SGFTAWGVEI
ARQVGLTLIG RMRGKRFVCL TGEERLIWDA DLETVPEDEK HHRRKGALID
|
|---|
| |