| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3714 |
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| Symbol | |
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| ID | 4254277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4439710 |
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| End bp | 4440606 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638120359 |
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| Product | formate dehydrogenase, subunit FdhD |
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| Protein accession | YP_735834 |
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| Protein GI | 113972041 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.272943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.525322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCTG ATAATAGTTC TAATATTGCT CAGCAAATGC AGTCCAATGA CAATCCGTCG
CAGCCCAAGC GAGCCTTCAC CTTTGTGAAA ACTCAGGCAG AAGTGCCACT CACTATAGCG
GTTAAAGCAG TGGATGAATC GGGTGAAGTG ATTGATAAGC ATGTTGCCTG CGAGAGGCCC
TTAACGGTTT ATCTGAACTG GCGCCCGATT GTGACTTTGA TGACCTTAGG AGCAAAACCC
GAGTCGCTCG CGTTAGGCTA TCTTAAAAAT CAGGGCTTTA TTTCAGATGT CAGCCAGTTA
GACTCTGTAA TTGTCGACTG GGATGTGAAC TCCGCCGCCG TATTAACCCG TGAACAAACT
GCCGATATTG AGCAAAAATT ATCGGAAAAA ACCGTGACCT CAGGCTGTGG TCAAGGAACT
GTATATGGCA GTTTTATGCA GGATTTAGAT GATATCCAGC TACCCACTCC TAGCCTTAAG
CAAAGTACGC TCTACAGTTT GCTTAAAAAT ATCAACGAAT ATAATGACAC TTATAAGAAT
GCCGGCGCCG TTCATGGCTG TGGTGTTTGC GAGAACGACC AGATCCTTGC CTTTGTGGAA
GATGTGGGGC GCCACAATGC CGTGGATACC TTAGCGGGTG ATATGTGGTT GGCACAGGAT
CGGGGCGATA ACAAAATTTT CTACACTACG GGACGACTCA CCTCGGAGAT GGTGATTAAG
GTCGCCAAAA TGGGGATCCC CGTACTGCTG TCGCGTAGTG GCGTGACACA AATGGGTTTG
GAGCTGGCTC AACAGCTGGG CATCACTATT ATTGCCCGAG CGAAAGGGCG CCACTTTTTG
ATCTATCACG GTAGTGAAAA TCTCGAATTT GATGTGAATA CCCCATCAGG CAACTAA
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| Protein sequence | MISDNSSNIA QQMQSNDNPS QPKRAFTFVK TQAEVPLTIA VKAVDESGEV IDKHVACERP
LTVYLNWRPI VTLMTLGAKP ESLALGYLKN QGFISDVSQL DSVIVDWDVN SAAVLTREQT
ADIEQKLSEK TVTSGCGQGT VYGSFMQDLD DIQLPTPSLK QSTLYSLLKN INEYNDTYKN
AGAVHGCGVC ENDQILAFVE DVGRHNAVDT LAGDMWLAQD RGDNKIFYTT GRLTSEMVIK
VAKMGIPVLL SRSGVTQMGL ELAQQLGITI IARAKGRHFL IYHGSENLEF DVNTPSGN
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