| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1030 |
|---|
| Symbol | |
|---|
| ID | 4281676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 1172163 |
|---|
| End bp | 1172954 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638137903 |
|---|
| Product | formate dehydrogenase accessory protein |
|---|
| Protein accession | YP_753715 |
|---|
| Protein GI | 114566561 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACGATG TTTTGTTGTT TCACGAGAAA AATATTTTAA TATATCGCCA GGGAGAAGTA
AGACCTTACC GGGATACACT GGTTATTGAG GTTCCCCTTA CGGTATATGC CAACGGGCAA
GAACTATCTA CCCTGGTCTG CTCCCCTCAA GGGTATAAGG AACTGGGGGT GGGTTATCTC
CTAAACGAAG GGATGATTTC AGACCCTGCT GATATCCAAG ATATACATCA TGACTCAGAT
AAAGGAATAC TCTTTGTAGA GGGGAAGATA GACACTCCTT CCAATGGTAA TGGGCACAAG
CGCTATTTCC CAGAGGATAA TGAAACACTA AATAGCAGTT TCTATTTTGC CAAAGATGCT
TGCCAGATTA GGCCGGTGAA ATCAGACTTT CGCATCCCTG CATCCCAGCT ATTGCAACTC
ATTTCTTTAT TGGAAGAAAA GTCGCTTACC TTTCGCCGGA CCGGGGGAGT TCACAGTGCA
GCCCTGGCTG ATAATTCAGG CCTAATTGTC AGGTATGAGG ATATCGGAAG GCATAATGCC
GTGGATAAGG TTTTGGGTTA TGCTTTTTTG AACGGCATTC CCCTGGATGA TAAATGTCTG
GTTTTGAGTG GGCGAGTTGC ATCAGAGATT ATGTTTAAAG TTGCCCGCAG GGGAATACCA
CTTATCCTAT CTCGTTCGGC CGCCATGCTA CTCGCAGTAG AACTGGCTGA AAAACTAGAC
ATCTGTATCG TGGGTTTTAC CCGAGGAGAG CAATTCAATG TCTATTGCCA TCCAGAACGT
ATCATTTTTT AG
|
|---|
| Protein sequence | MNDVLLFHEK NILIYRQGEV RPYRDTLVIE VPLTVYANGQ ELSTLVCSPQ GYKELGVGYL
LNEGMISDPA DIQDIHHDSD KGILFVEGKI DTPSNGNGHK RYFPEDNETL NSSFYFAKDA
CQIRPVKSDF RIPASQLLQL ISLLEEKSLT FRRTGGVHSA ALADNSGLIV RYEDIGRHNA
VDKVLGYAFL NGIPLDDKCL VLSGRVASEI MFKVARRGIP LILSRSAAML LAVELAEKLD
ICIVGFTRGE QFNVYCHPER IIF
|
|---|
| |