Gene Daud_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2010 
Symbol 
ID6026839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2116279 
End bp2117025 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content65% 
IMG OID641594832 
Productformate dehydrogenase family accessory protein FdhD 
Protein accessionYP_001718133 
Protein GI169832151 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.068526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCCGCG TCCCGATGAC GTTGACCAAC CTGCGCCCCA TGCACCGTTT CAGCAGCCTG 
GAAAATGTCC ACGGCTGGGA CGAGATCGTG ACCGAAGAGG AATTCGCAAT CCACATCGAC
GGTCATGAAT TCACCCGGCT CCTCTGCCTG CCGGCCGACC TGGAGTATTT GGCCGCAGGC
CACCTGGCGC TGGCCGGACG CCTGACCGAT CCCGGCGCAG TCGACCGGAT CGAAGTGGAT
TTTTCGGAAC GGGTTGTCCG GGTCTACACA CGGGCCGGCG ACAAGCCGGC ACCCGCAGCG
CAAACAGGGC GCCTCGAAAT GACGCCGGAG CAGGTCCGGG AATTCACCAA GCACCTGCCG
GCCATGTCGG CCCTTTTTCA GCGCACCGGC GGGGTCCACT CCGGCGGGCT GGTCGGGGAA
GGAAACCTGC TGTTCACAAT GGAGGACACC GGCCGGCACA ACGTGATGGA CAAAATCTAC
GGCCGGTCGT TTCTGGAGGG TATTCCGCTC GGCGATAAGG CCCTCCTGTT CAGCGGGCGC
AGCACGGCGG AAGTCCTGAT GAAGCTGGAG CGGATGGGCA TCCCGATGAT CATCGCTCGC
GGGGCGCCGA CCACCATGGC GATCGACCTG GCGGAGCGGG CGGGCATTAC CCTGGCCGCT
TACGCCCGGC CCGACCGGTT CAGCGTGTTC ACCCATCCGG GGCGGATCAT CGGCCCGCTC
GCAGATCCAG AACCCGGCCC TCGGTGA
 
Protein sequence
MSRVPMTLTN LRPMHRFSSL ENVHGWDEIV TEEEFAIHID GHEFTRLLCL PADLEYLAAG 
HLALAGRLTD PGAVDRIEVD FSERVVRVYT RAGDKPAPAA QTGRLEMTPE QVREFTKHLP
AMSALFQRTG GVHSGGLVGE GNLLFTMEDT GRHNVMDKIY GRSFLEGIPL GDKALLFSGR
STAEVLMKLE RMGIPMIIAR GAPTTMAIDL AERAGITLAA YARPDRFSVF THPGRIIGPL
ADPEPGPR