| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3282 |
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| Symbol | fdhD |
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| ID | 5712339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3448790 |
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| End bp | 3449674 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641269210 |
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| Product | putative formate dehydrogenase accessory protein FdhD |
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| Protein accession | YP_001534616 |
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| Protein GI | 159045822 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.610509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACTCG AGAACCCGTC CGACGAGTAT CTGATCGCCC CCGATCCGGG CCGCGCGCGC
CTGACCCGGG CCGTGACCGG CGTGGATCAG ACCGGCGCAG CCAGCGAGAT CGCCGTGGTC
GAGGAACGCC CCCTGACCAT CTTCCTCAAC AGCCGCGAGA TCGTCACCGC CATGACCATC
GGGGACTACC CCGAATACCT GGCCGTGGGC TTTCTGCGCA ATCAGGGCAT GCTGGCCAAG
GCGGATGTGA TCACCGGGGT GGAGTATGAC GACGATCTCG ACGTGGTGGT CGTGCGCACC
GAGACCGAGA CCGATTACGA GGACAAGCTC GCCAAGAAGA CCCGCACCTC CGGCTGCGCC
GTGGGCACGG TGTTCGGCGA CATCATGGAA GGGCTCGAAG GGCTGGCGCT ACCGCACACG
CAGGTCCGCA CCTCCTGGCT CTATGCGCTG GCGGCCAAGA TCAACCGCAC CCCCAGCCTG
TACCTGAGCG CGGGCGCGAT CCACGGCACC GTGCTGTGCG AAGGCGACCG CCCGCTGGTC
TACATGGAGG ACGTCGGCCG CCACAATGCG GTGGACAAGG TCGCGGGCTG GATGCGGGCC
GAGGGCATCT CCGGCGCGGA CAAGATCCTC TACACCACCG GTCGGCTGAC CTCGGAAATG
GTGATCAAGA CCGCCCTGAT GGGCATCCCC GTGCTCGCCT CACGATCCGG CTTCACCGCC
TGGGGGGTGG AGATCGCCCG CGACGTGGGC CTGACGGTGA TCGGCCGGAT GCGCGGCAAA
CGCTTCATCT GCCTTGCAGG CGAAGACCGG TTGATCTGGG ACGCAGATCT CGCCCAGGTG
GCCGAGGAAG ACCCGAAGTC CCGCCGCAAG AGTGCGCAGC CATGA
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| Protein sequence | MGLENPSDEY LIAPDPGRAR LTRAVTGVDQ TGAASEIAVV EERPLTIFLN SREIVTAMTI
GDYPEYLAVG FLRNQGMLAK ADVITGVEYD DDLDVVVVRT ETETDYEDKL AKKTRTSGCA
VGTVFGDIME GLEGLALPHT QVRTSWLYAL AAKINRTPSL YLSAGAIHGT VLCEGDRPLV
YMEDVGRHNA VDKVAGWMRA EGISGADKIL YTTGRLTSEM VIKTALMGIP VLASRSGFTA
WGVEIARDVG LTVIGRMRGK RFICLAGEDR LIWDADLAQV AEEDPKSRRK SAQP
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