| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0839 |
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| Symbol | |
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| ID | 4687324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 887975 |
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| End bp | 888847 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639833834 |
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| Product | formate dehydrogenase, subunit FdhD |
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| Protein accession | YP_981077 |
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| Protein GI | 121603748 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.145713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTC CTTACCTGAC GCAAGCCCAA GCCCCGTTGA CCAGCGAGAT CGAGGCGGTC
AACGAATTCG GCGAACTCCA AAAAGTCTCG ATTCCCGCCG AACGCGCGCT GACGGTCTAT
GTTGACAAGC GCGAACTGGT CACGCTGATG ACGCTGGGCG CGAATCCCGA ACTGCTGGTG
CTCGGCTACC TGCGCAACCA GCGGCTGGTC CGGGAAGTCG CCGACATCGA ATCCATCACC
GTTGACTGGG AAGTCGGCGC CGCCGCCGTC AAGACCCGCC ACGGCATTGA GGACATCGAG
GCAAAAACCG CGCAGCGGGT CGTCACGACC GGCTGCGGGC AGGGCAGCGT GTTTGGCGGC
CTGATGGACG AGGTGGACAG CATCAGGCTG CCCGCCGGGG AGTTCATCAC CCAAAGCCAG
CTCTACGGCC TGGTCAACAC CATCCGGCTC AAGGAAACGA CCTACAAGTC GGCCGGCTCG
GTGCATGCCT GCGCCCTGTT CTCGACCGCT TCGGGCGAAG CCGACATGCT GCTGTTCGTC
GAGGATGTGG GCCGGCACAA CGCGATTGAC ACGATTGCCG GGTGGATGTG GATGAACGAA
AACTCGTCCT TCAGTGATGC GAACCAGGTC TTCTACACCA CGGGCCGCCT GACCAGCGAG
ATGGTCATCA AGTCGGCGCA AATGGGCGTG CCGGTCGTCG TTTCGCGCAG CGGCATCACG
CAGATGGGCC ATCAGGTGGC GCAATCGGTG GGTTTGTGCG CGATTGGCCG GGCGACCAAC
AAGCGCTTTC TCTGCTACAC CCATGCCGAG CGGCTGAAGC TCCAGCCGGG GCTGGTGAGC
AAACCTGATG CTCAAAATAG CCAGGACGCC TGA
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| Protein sequence | MTLPYLTQAQ APLTSEIEAV NEFGELQKVS IPAERALTVY VDKRELVTLM TLGANPELLV
LGYLRNQRLV REVADIESIT VDWEVGAAAV KTRHGIEDIE AKTAQRVVTT GCGQGSVFGG
LMDEVDSIRL PAGEFITQSQ LYGLVNTIRL KETTYKSAGS VHACALFSTA SGEADMLLFV
EDVGRHNAID TIAGWMWMNE NSSFSDANQV FYTTGRLTSE MVIKSAQMGV PVVVSRSGIT
QMGHQVAQSV GLCAIGRATN KRFLCYTHAE RLKLQPGLVS KPDAQNSQDA
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