Gene Csal_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1909 
Symbol 
ID4028351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2169956 
End bp2170858 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content68% 
IMG OID637967103 
Productformate dehydrogenase, subunit FdhD 
Protein accessionYP_573960 
Protein GI92114032 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAACG CAGTGCAGAG CCAGGTAGTG CTGAGCCGGG CGCGGATGCC AACCACGCTG 
GAAATCACGG TGACCGACGA GTACGGCCAG TCGCGTCGTC AGGCCATCGC CGCCGAGCGT
GCCTTGACCG TCTACTTGAA TCGCCAGGAG ATCGTCACTC TGATGACGCT GGGCGCCGAG
CCGGAAGCGC TGGTGCTGGG GTATCTGCGC AACCAGGGCT TGCTGAGGCG GGTGGAGGAC
GTCGAGGCCT TGCAGGTCGA CTGGGAGGTC GAGGCAGCGG CCGTGGTGAC GCGGGCCTTG
CCGGAAGATC TCGATGCACG CCTGGCGCAG CGAACCGTGA CCACGGGGTG TGGCCAAGGC
ACCGTATTCG GGCGTCTGCT CGACGCCACC GATCTGCATC CGCTGCCGAA CGCGGCGTTG
TCGCAGGCGG TGCTCTACCG CCTGCTCGAC GACCTGGGGC GCTTCAACGA GACCTATCGC
AACGCCGGCG CCGTGCATGG CTGTGCCCTG TGCCGTCAGG ATCGGGTGCT GGGATTCGTC
GAGGATGTGG GGCGCCACAA TGCGGTGGAT ACGCTGGCCG GTCGGCAGTG GCTGGCGGCC
CTGGGCGAAG GCGCGCCGGA AGATGCCGAG CTGGCCTCGG CCGACATTTT CTACACCACG
GGACGGCTGA CCTCGGAAAT GGTGCTCAAG GTCGCGCAGA TGGGGATCAG CGTGCTGGTC
TCGCGCTCGG GCATGACCCA GAAGGGGGTC GAGCTGGCCA AGCGCTTCGG CGTGCTGCTG
GTGGCCCGCG CCAAGGGGCG GCATTTCCAG GTCGTCGATG ACCAGGCGCG CCTGGTGCTG
GATGCCAAGC CCGCGCCGCG TCCCGGCGAC AAGGCGGCAA CGCGCCGCAA GGGCGACGCA
TGA
 
Protein sequence
MSNAVQSQVV LSRARMPTTL EITVTDEYGQ SRRQAIAAER ALTVYLNRQE IVTLMTLGAE 
PEALVLGYLR NQGLLRRVED VEALQVDWEV EAAAVVTRAL PEDLDARLAQ RTVTTGCGQG
TVFGRLLDAT DLHPLPNAAL SQAVLYRLLD DLGRFNETYR NAGAVHGCAL CRQDRVLGFV
EDVGRHNAVD TLAGRQWLAA LGEGAPEDAE LASADIFYTT GRLTSEMVLK VAQMGISVLV
SRSGMTQKGV ELAKRFGVLL VARAKGRHFQ VVDDQARLVL DAKPAPRPGD KAATRRKGDA