More than 300 homologs were found in PanDaTox collection
for query gene EcDH1_2629 on replicon CP001637
Organism: Escherichia coli DH1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001637  EcDH1_2629  transcriptional regulator, TetR family  100 
 
 
212 aa  434  1e-121  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_1250  transcriptional regulator RutR  99.53 
 
 
212 aa  433  1e-121  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E2305  transcriptional regulator RutR  100 
 
 
212 aa  434  1e-121  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_01016  predicted DNA-binding transcriptional regulator  99.53 
 
 
212 aa  432  1e-120  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1128  transcriptional regulator RutR  99.53 
 
 
212 aa  432  1e-120  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2582  TetR family transcriptional regulator  99.53 
 
 
212 aa  432  1e-120  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.120721 
 
 
-
 
NC_010498  EcSMS35_2112  transcriptional regulator RutR  99.53 
 
 
212 aa  432  1e-120  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_1131  transcriptional regulator RutR  99.53 
 
 
212 aa  431  1e-120  Escherichia coli E24377A  Bacteria  normal  0.33999  n/a   
 
 
-
 
NC_009436  Ent638_1539  TetR family transcriptional regulator  83.49 
 
 
212 aa  373  1e-102  Enterobacter sp. 638  Bacteria  normal  normal  0.162694 
 
 
-
 
NC_011080  SNSL254_A1216  HTH-type transcriptional regulator RutR  82.55 
 
 
212 aa  369  1e-101  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal