Gene CPS_4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4062 
Symbol 
ID3522194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp4274258 
End bp4274914 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content43% 
IMG OID637286505 
ProductTetR family transcriptional regulator 
Protein accessionYP_270717 
Protein GI71281722 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTAA ATAGACCTGA AGAGAAGCCA ACTACCAAAC GTCGTCGTTC AAGAACCCGT 
GAAGCCCACG AAGTTAAAAT TATTGAAGCG GCGGAACACA TCTTTGCCCA CCGTGGTTAT 
AATGGTGCTA CTATAGAGTC CATTGCTGAG CAAGCAGGCT TCTCCAAGCA GAATATGCTA 
TATTATTTTT CCTCCAAAGA GCTACTCTAT CAGAAAGTGC TGAAAAATAT ATTAAATCTC 
TGGTTGGCAA GAATGAATCT AATAGACCAG GAAGGCACAG ATCCGGCCAC CATGTTATCC 
AATTACATAC GCGGTAAGTT GGAGATTTCC CAGAGCCACC CCAACGGCTC TAAAGTTTTT 
GCCAATGAAA TAATCAATGG TGCGCCGCAT ATTAGCCAAT ACCTTAAGGA AAATCTAGCG 
CCGGCGCTGG AAAGGGATGT CGAACTGGTT AAAGGCTGGA TTGTTCAAGG GTTAATTGAT 
GATATTGATC CCCATCACTT ATTTTTTGTG ATCTGGGCGT CCACCCAGAC CTATGCCGAC 
TTCTCCACTC AGATCCAGAT AGCTTTGGGC AAATCTTCGC TTGAAAATGA TGATTTCAAA 
AGTGCTGGTG ATTTCCTCAC CCACACCTTG CTAAAAGGTA TCGGCCTTAA TATTTAG
 
Protein sequence
MLLNRPEEKP TTKRRRSRTR EAHEVKIIEA AEHIFAHRGY NGATIESIAE QAGFSKQNML 
YYFSSKELLY QKVLKNILNL WLARMNLIDQ EGTDPATMLS NYIRGKLEIS QSHPNGSKVF 
ANEIINGAPH ISQYLKENLA PALERDVELV KGWIVQGLID DIDPHHLFFV IWASTQTYAD 
FSTQIQIALG KSSLENDDFK SAGDFLTHTL LKGIGLNI