Gene PSPTO_3698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3698 
Symbol 
ID1185363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp4169607 
End bp4170215 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content60% 
IMG OID637395045 
Producttranscriptional regulator, TetR family 
Protein accessionNP_793472 
Protein GI28870853 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTA TTCGCGAGCG CAACAAAGAA CTCATCCTGC GCGCTGCCAG CGAGGAATTC 
GCCGACAAAG GCTTCGCCGC CAGCAAGACC AGCGATATCG CCGCCAAGGC CGGTGTTCCC 
AAACCCAACG TCTATTACTA CTTCAAATCC AAGGAAAACC TCTACCGCGA GGTGCTGGAA 
AGCATCATCG AGCCTATTCT GCGCGCGTCG ACGCCCTTCA ACCCGCAAGG TGTCCCGGCC 
GAAGTGCTCA GCCGCTACAT CCGCTCGAAA ATAGAGATTT CCCGCGACCT GCCCTTCGCG 
TCGAAGGTGT TCGCCAGTGA GATCATGCAC GGCGCCCCGC ACCTGACACC GGAGCAGATC 
GAACAGCTCA ACGGCCAGGC GCGGCACAAT ATCGAGTGCA TTCAGGCCTG GATCGACAAA 
GGGCTGATTG CCGCGCTGGA CCCTCATCAT CTGATGTTCA CCATCTGGGC CGCGACCCAG 
ACCTACGCCG ATTTCGACTG GCAGATTGCG ACCGTCACCG GCAAGGCGAA GCTGGACGAT 
GCCGATTACG AGGCGGCCAC GCAAACCATT CTCAGGCTGG TGCTCAAGGG CTGCGAGCCG 
GATCGCTGA
 
Protein sequence
MSSIRERNKE LILRAASEEF ADKGFAASKT SDIAAKAGVP KPNVYYYFKS KENLYREVLE 
SIIEPILRAS TPFNPQGVPA EVLSRYIRSK IEISRDLPFA SKVFASEIMH GAPHLTPEQI 
EQLNGQARHN IECIQAWIDK GLIAALDPHH LMFTIWAATQ TYADFDWQIA TVTGKAKLDD 
ADYEAATQTI LRLVLKGCEP DR