| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0675 |
|---|
| Symbol | |
|---|
| ID | 3366153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 765199 |
|---|
| End bp | 765861 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637651017 |
|---|
| Product | regulatory protein, TetR |
|---|
| Protein accession | YP_233783 |
|---|
| Protein GI | 66043942 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTTG AAGTCCCCGC ACACAGCGCT CACGTCACCA AGCCTGCAAG CCGTATTCGT
CAGAAGAACG AAGAAGCGAT CATCCAGGCA GCCGAAGATG AATTCGCCCG CCACGGTTTC
AAGGGCACCA GCATGAACAC CATCGCGATC AAGGCCGGGC TGCCAAAGGC CAATCTGCAT
TACTACTTCA CCAATAAACT CGGCCTGTAT GTCGCGGTGC TCAGCAACAT CATCGATTTG
TGGGACAGCA CCTTCAACCA CCTCAGCGTC GAAGACGATC CCGCAGAGGC GCTGGCCCGC
TATATTCGCG CCAAGATGGA GTTCTCGCGC CGCCAGCCAC AGGCTTCGCG GATCTTCGCC
ATGGAGATCA TCAGCGGCGG CGAATGCATG AGCGAGTATT TCAGTCAGGA TTACCGTCTG
TGGTTTCAGG GCCGGGCCGC GGTCTTTCAA GCCTGGATCG ACGCCGGCAA GATGGACCCC
GTCGACCCGG TGCACCTGAT CTTCCTGCTA TGGGGCAGCA CCCAGCACTA TGCCGACTTC
GCCTCGCAGA TCTGTCGCGT CACCGGTCGC TCCCGACTGA CGCGCCAGGA CATGGATCAG
GCCAGCAACA ATCTCATTCG AATCATCCTC AAAGGTTGTG GGCTCGCGCC GCCAGCCTTG
TAG
|
|---|
| Protein sequence | MTLEVPAHSA HVTKPASRIR QKNEEAIIQA AEDEFARHGF KGTSMNTIAI KAGLPKANLH
YYFTNKLGLY VAVLSNIIDL WDSTFNHLSV EDDPAEALAR YIRAKMEFSR RQPQASRIFA
MEIISGGECM SEYFSQDYRL WFQGRAAVFQ AWIDAGKMDP VDPVHLIFLL WGSTQHYADF
ASQICRVTGR SRLTRQDMDQ ASNNLIRIIL KGCGLAPPAL
|
|---|
| |