Gene Dshi_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1365 
Symbol 
ID5712541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1418132 
End bp1418767 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content60% 
IMG OID641267277 
Producttranscriptional regulator 
Protein accessionYP_001532708 
Protein GI159043914 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.575727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTT CCAGTACCAG CGCCCGTCCA GCCCCGCAGA CTCGTATTCA GAAGGCCAAG 
CGCGAAGCAA TTTTCGATGC TGCGCTCGAC GTCTTCTCGC AGCACGGGTT CCGCGGCGCG
ACGCTGGACA TGATCGCGGC GGGCGCCGGC CTGTCCAAAC CGAACGTGCT TTACTATTTC
GAGGGCAAGG AGGCGATTTA CACCCAGGTT CTTGCCCAGA TCCTGGAAAC CTGGCTGGAC
CCGATGTTGA ACATGGACCC GGCCGGGGAG CCACTGGAGG AAATACGGGG ATATGTGCGC
CGCAAACTTG AGATGGCACG TGAATATCCA CGCGAAAGTC GTTTGTTTGC AACGGAAATC
CTGCAAGGTG CGCCACAGAT AAAGTCCCTT CTGAGCGGCG CGTTGCGCGA TCTGGTGGAG
AAGAACGGTC AAGTGATCGC GGGCTGGGCC GCCGAGGGCA AGATCGCCGA TGTGCACCCC
AAGCACCTGA TCTTCATGAT CTGGGCGACC ACGCAGCATT ACGCCGATTT CCGCACCCAG
ATCGACCTCG TTCTGGGCAC GGGCGAAGAC CCATTCCCGG ACGCCCAGCA CTTTCTCGAC
CACATGTTCA CACGGATGCT GAACCCCGAC ACCTGA
 
Protein sequence
MARSSTSARP APQTRIQKAK REAIFDAALD VFSQHGFRGA TLDMIAAGAG LSKPNVLYYF 
EGKEAIYTQV LAQILETWLD PMLNMDPAGE PLEEIRGYVR RKLEMAREYP RESRLFATEI
LQGAPQIKSL LSGALRDLVE KNGQVIAGWA AEGKIADVHP KHLIFMIWAT TQHYADFRTQ
IDLVLGTGED PFPDAQHFLD HMFTRMLNPD T