Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1365 |
Symbol | |
ID | 5712541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1418132 |
End bp | 1418767 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641267277 |
Product | transcriptional regulator |
Protein accession | YP_001532708 |
Protein GI | 159043914 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.575727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGTT CCAGTACCAG CGCCCGTCCA GCCCCGCAGA CTCGTATTCA GAAGGCCAAG CGCGAAGCAA TTTTCGATGC TGCGCTCGAC GTCTTCTCGC AGCACGGGTT CCGCGGCGCG ACGCTGGACA TGATCGCGGC GGGCGCCGGC CTGTCCAAAC CGAACGTGCT TTACTATTTC GAGGGCAAGG AGGCGATTTA CACCCAGGTT CTTGCCCAGA TCCTGGAAAC CTGGCTGGAC CCGATGTTGA ACATGGACCC GGCCGGGGAG CCACTGGAGG AAATACGGGG ATATGTGCGC CGCAAACTTG AGATGGCACG TGAATATCCA CGCGAAAGTC GTTTGTTTGC AACGGAAATC CTGCAAGGTG CGCCACAGAT AAAGTCCCTT CTGAGCGGCG CGTTGCGCGA TCTGGTGGAG AAGAACGGTC AAGTGATCGC GGGCTGGGCC GCCGAGGGCA AGATCGCCGA TGTGCACCCC AAGCACCTGA TCTTCATGAT CTGGGCGACC ACGCAGCATT ACGCCGATTT CCGCACCCAG ATCGACCTCG TTCTGGGCAC GGGCGAAGAC CCATTCCCGG ACGCCCAGCA CTTTCTCGAC CACATGTTCA CACGGATGCT GAACCCCGAC ACCTGA
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Protein sequence | MARSSTSARP APQTRIQKAK REAIFDAALD VFSQHGFRGA TLDMIAAGAG LSKPNVLYYF EGKEAIYTQV LAQILETWLD PMLNMDPAGE PLEEIRGYVR RKLEMAREYP RESRLFATEI LQGAPQIKSL LSGALRDLVE KNGQVIAGWA AEGKIADVHP KHLIFMIWAT TQHYADFRTQ IDLVLGTGED PFPDAQHFLD HMFTRMLNPD T
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