Gene Bcen_1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1598 
Symbol 
ID4092883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp1774953 
End bp1775645 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID638014872 
ProductTetR family transcriptional regulator 
Protein accessionYP_621476 
Protein GI107023149 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.535122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACATG ACGAGGCGGC AATCGCAGCC ACCGACCGTG ACGAAACGCC GGCGCCTTTG 
CGGCGACGCA AGGCGCATAT TCGCGAGTCC AACGAAGCGC ATCTGCTCGC GTGCGCGGAA 
GCCGTATTCG CGGAACGCGG GCTCGCCGGC GCCAGCACCG CGATGATCGC GGAGCGCGCC 
GGCCTGCCGA AGGCGAACGT GCACTACTAC TTCCCGACCA AGCTCGCGCT GTACCGCCGC 
GTGCTCGACG ACCTGTTCGA GGACTGGCAT CGCGCGGCCG GCTCGTTCGA GGCCGACGAC 
GATCCGGTCG AAGCGATCGG CGGCTACGTG CGCGCGAAGA TGACGCTGTC GCAGCGGCGC 
CCGCTCGGCT CGAAGGTGTG GGCCAACGAG ATCATCCACG GCGCGGAGCA CATGCAGGAC 
ATCCTGTCGC AACGCGTGAA GCCGTGGTTC GACGCGCGCG TCAGGGTGAT CGAAGGCTGG 
ATCGCGCGCG GGCTGCTCGC GCCGATCGAC CCGCATGCGC TGATGTACCT GATCTGGGCG 
ACCACGCAGC ACTATGCGGA TTTCGATGCG CAGATTCGCG CGCTGAGCGG CAAGCGCGCG 
TTCACGAAGA AGGCGTTCGA CGAAAAGACC GAGCAGGTCG TGCAGCTCGT GATTCGCGCG 
TGCGGCGCGG TGTCGCCGAA CGCGAAGCCT TAA
 
Protein sequence
MRHDEAAIAA TDRDETPAPL RRRKAHIRES NEAHLLACAE AVFAERGLAG ASTAMIAERA 
GLPKANVHYY FPTKLALYRR VLDDLFEDWH RAAGSFEADD DPVEAIGGYV RAKMTLSQRR 
PLGSKVWANE IIHGAEHMQD ILSQRVKPWF DARVRVIEGW IARGLLAPID PHALMYLIWA 
TTQHYADFDA QIRALSGKRA FTKKAFDEKT EQVVQLVIRA CGAVSPNAKP