Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_44980 |
Symbol | |
ID | 4383170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4010323 |
End bp | 4010973 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639326184 |
Product | TetR family transcriptional regulator |
Protein accession | YP_791749 |
Protein GI | 116049448 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCA TCCGCGAGCG CAACAAGCGC CTGATCCTCC GCGCCGCCAG CGAGGAATTC GCCGACAAGG GCTTCGCGGC GACCAAGACC AGCGACATCG CCGCCCGCGC CGGCCTGCCC AAGCCCAACG TCTACTACTA CTTCCAGTCC AAGGAAAACC TCTATCGCTG CGTGCTGGAA AGCATCGTCG AGCCGCTGCT GCAAGCGTCG GCGCCGTTCC GCGTGGAAGA CGACCCGCTG CTCGCCCTGC CCGCCTACAT CCGCTCGAAG ATCCGCATCT CCCGCGAGCT GCCGCATGCC TCCAAGGTCT TCGCCAGCGA GATCATGCAC GGCGCGCCGC ACCTGCCGAA GGAATACCTC GACGAACTGA ACGCCCAGGC CCAGCGCAAC GTCACCTGCC TGCAGACCTG GATCGACCGT GGCCAGCTCG CCCCGGTGGA CCCGCATCAC CTGCTCTTCG CCATCTGGGC GGCGACCCAG ACCTATGCCG ACTTCGATTG GCAGATTTCC ATCGTCACCG GCAAGGAACA GCTCAGCGAC GCCGACTACG ACGCTGCGGT GGAAACCATC ACCCGCCTGG TCCTGAAAGG CTGCGCGCCC GACGGGCAAT CCGGCAAGAG CGCCGGCCGG CTTCGGCCGC TGCCGCTCTG A
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Protein sequence | MTSIRERNKR LILRAASEEF ADKGFAATKT SDIAARAGLP KPNVYYYFQS KENLYRCVLE SIVEPLLQAS APFRVEDDPL LALPAYIRSK IRISRELPHA SKVFASEIMH GAPHLPKEYL DELNAQAQRN VTCLQTWIDR GQLAPVDPHH LLFAIWAATQ TYADFDWQIS IVTGKEQLSD ADYDAAVETI TRLVLKGCAP DGQSGKSAGR LRPLPL
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