Gene PA14_44980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_44980 
Symbol 
ID4383170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4010323 
End bp4010973 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID639326184 
ProductTetR family transcriptional regulator 
Protein accessionYP_791749 
Protein GI116049448 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA TCCGCGAGCG CAACAAGCGC CTGATCCTCC GCGCCGCCAG CGAGGAATTC 
GCCGACAAGG GCTTCGCGGC GACCAAGACC AGCGACATCG CCGCCCGCGC CGGCCTGCCC
AAGCCCAACG TCTACTACTA CTTCCAGTCC AAGGAAAACC TCTATCGCTG CGTGCTGGAA
AGCATCGTCG AGCCGCTGCT GCAAGCGTCG GCGCCGTTCC GCGTGGAAGA CGACCCGCTG
CTCGCCCTGC CCGCCTACAT CCGCTCGAAG ATCCGCATCT CCCGCGAGCT GCCGCATGCC
TCCAAGGTCT TCGCCAGCGA GATCATGCAC GGCGCGCCGC ACCTGCCGAA GGAATACCTC
GACGAACTGA ACGCCCAGGC CCAGCGCAAC GTCACCTGCC TGCAGACCTG GATCGACCGT
GGCCAGCTCG CCCCGGTGGA CCCGCATCAC CTGCTCTTCG CCATCTGGGC GGCGACCCAG
ACCTATGCCG ACTTCGATTG GCAGATTTCC ATCGTCACCG GCAAGGAACA GCTCAGCGAC
GCCGACTACG ACGCTGCGGT GGAAACCATC ACCCGCCTGG TCCTGAAAGG CTGCGCGCCC
GACGGGCAAT CCGGCAAGAG CGCCGGCCGG CTTCGGCCGC TGCCGCTCTG A
 
Protein sequence
MTSIRERNKR LILRAASEEF ADKGFAATKT SDIAARAGLP KPNVYYYFQS KENLYRCVLE 
SIVEPLLQAS APFRVEDDPL LALPAYIRSK IRISRELPHA SKVFASEIMH GAPHLPKEYL
DELNAQAQRN VTCLQTWIDR GQLAPVDPHH LLFAIWAATQ TYADFDWQIS IVTGKEQLSD
ADYDAAVETI TRLVLKGCAP DGQSGKSAGR LRPLPL