| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1777 |
|---|
| Symbol | |
|---|
| ID | 3367285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 2024775 |
|---|
| End bp | 2025383 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637652126 |
|---|
| Product | regulatory protein, TetR |
|---|
| Protein accession | YP_234863 |
|---|
| Protein GI | 66045022 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.26768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.308935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGTA TCCGCGAGCG CAACAAAGAA CTCATCCTGC GCGCTGCCAG CGAGGAATTC
GCCGACAAAG GCTTTGCCGC CAGCAAGACC AGCGACATCG CGGCCAAGGC CGGTGTCCCC
AAGCCCAACG TCTATTACTA CTTCAAATCC AAGGAAAACC TCTATCGCGA GGTGCTGGAA
AGCATCATCG AGCCCATTCT GCGTGCGTCG ACGCCCTTCA ACCCCGAAGG CGTGCCTGCC
GAAGTCCTCA GCCGCTATAT CCGTTCGAAA ATCCAGATTT CCCGTGACCT GCCCTTCGCC
TCGAAAGTGT TCGCCAGCGA GATCATGCAT GGCGCCCCGC ACCTGACAGC GCAGCAGATC
GAACAGCTCA ATGGCCAGGC ACGGCACAAC ATCGAATGCA TCCAGGCCTG GATCGACAGC
GGACAGATCG CCCCGCTCGA TCCTCATCAC CTGATGTTCA CCATCTGGGC CGCGACCCAG
ACCTACGCCG ATTTCGACTG GCAGATCGCA ACGGTCACCG GCAAGGCAAA ACTGCAGGAT
GCCGATTACG AGGCGGCCAC CCGGACCATC CTCAGGCTGG TGCTCAAAGG CTGCGAGCCG
GACCGCTGA
|
|---|
| Protein sequence | MSSIRERNKE LILRAASEEF ADKGFAASKT SDIAAKAGVP KPNVYYYFKS KENLYREVLE
SIIEPILRAS TPFNPEGVPA EVLSRYIRSK IQISRDLPFA SKVFASEIMH GAPHLTAQQI
EQLNGQARHN IECIQAWIDS GQIAPLDPHH LMFTIWAATQ TYADFDWQIA TVTGKAKLQD
ADYEAATRTI LRLVLKGCEP DR
|
|---|
| |