Gene PA14_40380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_40380 
Symbol 
ID4385895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3609235 
End bp3609885 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID639325807 
ProductTetR family transcriptional regulator 
Protein accessionYP_791376 
Protein GI116049817 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TCCGCCAACG CAACCTGCAA CTGATCCTCG ACGCCGCCTG CGAAGTCTTC 
GCCGACTGCG GCTTCAGCGC CGCCCGGCTC AGCGACGTCG CCGAGCGCGC CGGCGTGGCG
AAGGCCAACG TGCTCTATTA CTACCGCTCC AAGGCGCAAC TCTACGAGGC GGTGCTGGAC
AGCATCGTCG AGCCTCTGCT GGAAGCCTCC CGGCCATTCG CCGGTGACCA GCCGCCCGCC
GAGGCGCTAC GCGCCTACGT CGACAACAAG ATGCGCATCG GCGCCGAGCG GCCGCACGCG
GCCAGGGTCT TCTCCTGCGA GATCATGCGC GGCGCGCCGC GCATGCCGGC GGCGCTGCTG
GAACGCCTCG ACGCCCAGGC GGAACGCAAC GCCGAGCGCA TCCGCCAGTG GATCGACGAA
GGCCTGCTGG CGCCGCTGGA TCCGTACCAC CTGCTGCTCA ACCTGTGGGC GATGACCGAG
TCCTATGCCC TTGGCGGCTG GCAACTGGCG CGCCTCACCG GCCAGGCCGG GCTGGACGCG
AGCGACTACC GGCAGGCGGC GGAAAACATC GTCCGCCTGG TCTGCGCCGG CTGCCTGGCA
CTCCCCGGCG AGGCCGCGCC GCGTCGGCGT TTCCGCGCGC TGGCCGGCTG A
 
Protein sequence
MKKIRQRNLQ LILDAACEVF ADCGFSAARL SDVAERAGVA KANVLYYYRS KAQLYEAVLD 
SIVEPLLEAS RPFAGDQPPA EALRAYVDNK MRIGAERPHA ARVFSCEIMR GAPRMPAALL
ERLDAQAERN AERIRQWIDE GLLAPLDPYH LLLNLWAMTE SYALGGWQLA RLTGQAGLDA
SDYRQAAENI VRLVCAGCLA LPGEAAPRRR FRALAG