Gene SbBS512_E2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2305 
SymbolrutR 
ID6272508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp2096334 
End bp2096972 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content51% 
IMG OID641726317 
Producttranscriptional regulator RutR 
Protein accessionYP_001880800 
Protein GI187730655 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID[TIGR03613] pyrimidine utilization regulatory protein R 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAG GCGCAGTGAA AACAACGGGT AAACGTTCGC GCGCAGTAAG CGCGAAGAAA 
AAAGCGATTC TTAGCGCAGC ACTGGACACT TTTTCACAAT TCGGTTTTCA CGGCACAAGG 
CTGGAGCAGA TCGCAGAGTT GGCGGGTGTT TCAAAAACCA ATCTGCTGTA TTACTTTCCG 
TCAAAAGAGG CGCTGTATAT TGCCGTGCTG CGGCAGATTC TCGATATCTG GCTGGCACCG 
TTAAAAGCGT TTCGTGAAGA TTTCGCCCCG CTGGCGGCGA TCAAAGAGTA CATCCGTCTG 
AAGCTGGAAG TCTCACGCGA TTATCCGCAG GCTTCGCGCC TGTTCTGTAT GGAGATGCTG 
GCAGGCGCGC CGCTGTTAAT GGATGAACTG ACGGGCGATT TGAAGGCATT AATTGATGAG 
AAATCGGCGC TGATTGCCGG TTGGGTCAAA AGCGGCAAAC TCGCGCCGAT TGATCCGCAG 
CATTTGATTT TTATGATTTG GGCTTCCACT CAACATTACG CCGATTTCGC CCCTCAGGTG 
GAGGCGGTGA CAGGCGCAAC GTTGCGCGAT GAGGTATTTT TCAATCAAAC GGTTGAAAAC 
GTGCAGCGGA TTATTATTGA GGGGATTCGA CCACGTTAA
 
Protein sequence
MTQGAVKTTG KRSRAVSAKK KAILSAALDT FSQFGFHGTR LEQIAELAGV SKTNLLYYFP 
SKEALYIAVL RQILDIWLAP LKAFREDFAP LAAIKEYIRL KLEVSRDYPQ ASRLFCMEML 
AGAPLLMDEL TGDLKALIDE KSALIAGWVK SGKLAPIDPQ HLIFMIWAST QHYADFAPQV 
EAVTGATLRD EVFFNQTVEN VQRIIIEGIR PR