| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2860 |
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| Symbol | |
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| ID | 5748437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3135020 |
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| End bp | 3135700 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297956 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001563883 |
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| Protein GI | 160898301 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.253372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCC TTTCTGACAA TGCGCCCCCT TCCCTGGCGC GATCGGCCAC GCGCAAACCC
ACGGCCGCAC GGCTGCGCAA GGAACTGAAC ATCCTGCAGA CGGCCGAGCT TCACTTTGCG
CAATACGGCC TCGAAGGCGC ATCGCTGGAA CTGATCGCGC ACGACGCCGG TCTGAGCCGC
CACAACCTGC TGTACTACTT CGCCAGCAAG GAGGAGCTGT ACCTGCGCGT GCTGGGCGAC
GTGCTGACGC AGTGGCTCGC CGGCATGTCC GACCTGCTGC GGGGCGACGA CCCTGCGGAG
GCCTTGCGCA TCTACATCCG GGCCAAGCTG CAGTCCTCGC GCGAACGGCC CCATGGCTCC
CGTGTCTTCA CGCGCGAAGT GATGGCCGGT GCGCCCCGCT TCGGGCAGGC CATAGCGAGC
CAGGTGGGCC CGGCGCTGGC AGCAGACGTG CAGGCCTTCG AGCGCTGGGT GGCGCAGGGC
AAGATTGCCC GCGTGGATTT CACCCACCTG ATGTTCATCC TCTGGTCCGT GACCCAGGCC
TATGCCGACC AGCAGGCCCA GTTCGCGCTG CTGCTGGGCC GGTCGGAACT GACCGCCGAC
GACTACGACA CGGCGGCCGA TCTGATCTAC CGGCTGGTAA TCCGTGGCCT GCAGCCGGAT
ACCGCGGCTC TCGCACAATG A
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| Protein sequence | MATLSDNAPP SLARSATRKP TAARLRKELN ILQTAELHFA QYGLEGASLE LIAHDAGLSR
HNLLYYFASK EELYLRVLGD VLTQWLAGMS DLLRGDDPAE ALRIYIRAKL QSSRERPHGS
RVFTREVMAG APRFGQAIAS QVGPALAADV QAFERWVAQG KIARVDFTHL MFILWSVTQA
YADQQAQFAL LLGRSELTAD DYDTAADLIY RLVIRGLQPD TAALAQ
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