Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0381 |
Symbol | |
ID | 4905661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 363167 |
End bp | 363886 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640143488 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001074424 |
Protein GI | 126457735 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACACG ACGATCCGAC GACGACGCCC CCCGACGCGC CCGCGCCGCG CGCCCGGACG AAAGCGGCGC ACGCGCCGAG CCGCGCGCGC AAGGCGCACA TCCGCGAGCT GAACGAGGCG CACCTGCTCG CATGCGCGGA AGCGGTGTTC GCCGAGCGCG GCTTCGAGGG CGCGAGCACC GCGCTGATCG CCGAGCGCGC GGGGCTGCCG AAGGCGAACC TGCACTATTA CTTTCCGACG AAGCTCGCGC TGTACCGGCG CGTGCTCGAC GACCTGCTCG AGGATTGGCA CGCCGCCGCC GACAGCTTCG ACGTCGGCGA CGATCCCGTC GCCGCGCTCG GCGGCTACGT GCGCGCGAAG ATGGCGCTGT CGCGCGAGCG GCCGCTCGGC TCGAAGGTAT GGGCGAACGA GATCATCAGC GGCGCGACGC ACATGCAGGA CCTGCTGCTC GAACGCGTGA AGCCGTGGAT GGATACGCGG ATCGCGCTGA TCGAGCGCTG GATCGCGCGC GGGCTGGTCG AACCGGTCGA GCCGAAGACG CTGCTCTACA TGATCTGGGC GACGACCCAG CATTACGCGG ACTTCGACGC GCAGATCGTC GCGCTGTCCG GCAAGCACGG GCTATCGGCG AAGGCGTTCG ATGCGACGAC CGATGAAGTC GTGCGGCTGA TCCTGCGCGC GTGCGGCGCG CGCTCGCCGC ACGCGCGGCA GCCGGCGTAG
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Protein sequence | MPHDDPTTTP PDAPAPRART KAAHAPSRAR KAHIRELNEA HLLACAEAVF AERGFEGAST ALIAERAGLP KANLHYYFPT KLALYRRVLD DLLEDWHAAA DSFDVGDDPV AALGGYVRAK MALSRERPLG SKVWANEIIS GATHMQDLLL ERVKPWMDTR IALIERWIAR GLVEPVEPKT LLYMIWATTQ HYADFDAQIV ALSGKHGLSA KAFDATTDEV VRLILRACGA RSPHARQPA
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