Gene Rsph17029_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1818 
Symbol 
ID4897083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand+ 
Start bp1918414 
End bp1919046 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content66% 
IMG OID640112412 
ProductTetR family transcriptional regulator 
Protein accessionYP_001043697 
Protein GI126462583 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.671958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.199135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGATG CAGCCCGCCC TTCCAAGCGC GAGGAAACCC GCCGCGAGAC CGAGCGCACC 
ATCCTCGCGG CCGCTGAAAA AGTCTTTGCG GAAGCGGGGT TTGGCGGGGC AACCATGCAG 
CTCATCGCCG ACATGGCGGG GCTGCCCAAG GCCAATCTGC ACTATTATTT CCCGACCAAG 
GAGGCGCTCT ACCGTCGCGT CGTGGGCGAG ATCTTCGAGA TCTGGCTGCA GGCCGCCGAG 
GCGCTGGATC AGGCGCAGTG CCCGGTGGAG GGCATCGGTG CCTATATCGA CGCCAAGATG 
GAAATCTCGC GCCGCCATCC GTTCGGCTCG AAGGTCTGGG CCTCCGAGGT GATGCACGGC 
GCCCCGGTGA TCCAGGATTA TCTGGAAACC ACGCTGCGCG ACTGGACCGA GGGACGGGCG 
GCGGCGATCC GGCGCTGGAT CGCCAACGGG CAGATGCAGC CCGTCGATCC GCATCACCTG 
CTCTACATGC TCTGGGCCAC GACCCAGCAT TATGCCGACT TCGGCCACCA GATCGAGACA 
CTGAACGGCG GGCGGCCGCT CTCGGACGAG GATTGGGCCG CCGCCACCCG CAGCGTCAAG 
GAGATCATCC TGCGCGGCGT GGGCGCCCTC TGA
 
Protein sequence
MPDAARPSKR EETRRETERT ILAAAEKVFA EAGFGGATMQ LIADMAGLPK ANLHYYFPTK 
EALYRRVVGE IFEIWLQAAE ALDQAQCPVE GIGAYIDAKM EISRRHPFGS KVWASEVMHG 
APVIQDYLET TLRDWTEGRA AAIRRWIANG QMQPVDPHHL LYMLWATTQH YADFGHQIET 
LNGGRPLSDE DWAAATRSVK EIILRGVGAL