| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1250 |
|---|
| Symbol | rutR |
|---|
| ID | 6969699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 1257340 |
|---|
| End bp | 1257978 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643385242 |
|---|
| Product | transcriptional regulator RutR |
|---|
| Protein accession | YP_002269737 |
|---|
| Protein GI | 209399177 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR03613] pyrimidine utilization regulatory protein R |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAG GCGCAGTGAA AACAACGGGT AAACGTTCGC GCGCAGTAAG CGCGAAGAAA
AAAGCGATTC TTAGCGCAGC ACTGGACACT TTTTCACAAT TCGGTTTTCA CGGCACACGG
CTGGAGCAAA TTGCAGAGTT GGCGGGTGTT TCAAAAACCA ATCTGCTGTA TTACTTTCCG
TCAAAAGAGG CGCTGTATAT TGCCGTGCTG CGGCAGATTC TCGATATCTG GCTGGCACCG
TTAAAAGCGT TTCGTGAAGA TTTCGCCCCG CTGGCGGCGA TCAAAGAGTA CATCCGTCTG
AAGCTGGAAG TCTCACGCGA TTATCCGCAG GCTTCGCGCC TGTTCTGTAT GGAGATGCTG
GCAGGCGCGC CGCTGTTAAT GGATGAACTG ACGGGCGATT TGAAGTCATT AATTGATGAG
AAATCGGCGC TGATTGCCGG TTGGGTCAAA AGCGGCAAAC TCGCGCCGAT TGATCCGCAG
CATTTGATTT TTATGATTTG GGCTTCCACT CAACATTACG CCGATTTCGC CCCTCAGGTG
GAGGCGGTGA CAGGCGCAAC GTTGCGCGAT GAGGTATTTT TCAATCAAAC GGTTGAAAAC
GTGCAGCGGA TTATTATTGA GGGGATTCGA CCACGCTAA
|
|---|
| Protein sequence | MTQGAVKTTG KRSRAVSAKK KAILSAALDT FSQFGFHGTR LEQIAELAGV SKTNLLYYFP
SKEALYIAVL RQILDIWLAP LKAFREDFAP LAAIKEYIRL KLEVSRDYPQ ASRLFCMEML
AGAPLLMDEL TGDLKSLIDE KSALIAGWVK SGKLAPIDPQ HLIFMIWAST QHYADFAPQV
EAVTGATLRD EVFFNQTVEN VQRIIIEGIR PR
|
|---|
| |