| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1574 |
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| Symbol | |
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| ID | 5194423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1759100 |
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| End bp | 1759711 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640586043 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001266914 |
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| Protein GI | 148546812 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00597987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACCA TTCGCGAGCG CAACAAGGAA TTGATCCTGC GCGCGGCCAG CGAGGAATTC
GCCGACAAGG GCTTCGCCGC CACCAAGACC AGCGATATCG CGGCCAAGGC CGGCCTGCCC
AAGCCGAACG TGTACTACTA CTTCAAGTCC AAGGACAACC TTTACCGCGA GGTCCTGGAA
AGCATCATCG CGCCGATCAT GCAGGCATCC ACGCCGTTCA ATGCAGACGG CGACCCGAAG
GAAGTGCTGA GTGCGTACAT TCGTTCGAAA ATTCGCATTT CGCGTGACCT GCCCCATGCG
TCCAAGGTGT TCGCCAGCGA GATCATGCAT GGCGCGCCGC ACCTGTCACC GAACCAGGTA
GAGCAGTTGA ACGAGCAGGC CCGGCACAAC ATCGAGTGCA TCCAGCGCTG GATCGACCGC
GGGCAGATCG CCCATGTGGA CGCGCATCAC CTGATGTTCA GCATCTGGGC GGCGACCCAG
ACCTATGCGG ACTTCGACTG GCAGATTTCT GCGGTGACCG GCAAGGCCAA GCTGGCCGAC
AGTGATTATG ACGCGGCGGC CGAAACCATT ATTCGTATGG TCTTGAAAGG TTGTGAGCCT
GAGGCAGCCT GA
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| Protein sequence | MSTIRERNKE LILRAASEEF ADKGFAATKT SDIAAKAGLP KPNVYYYFKS KDNLYREVLE
SIIAPIMQAS TPFNADGDPK EVLSAYIRSK IRISRDLPHA SKVFASEIMH GAPHLSPNQV
EQLNEQARHN IECIQRWIDR GQIAHVDAHH LMFSIWAATQ TYADFDWQIS AVTGKAKLAD
SDYDAAAETI IRMVLKGCEP EAA
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