Gene Jann_2710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2710 
Symbol 
ID3935174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand+ 
Start bp2719777 
End bp2720388 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content63% 
IMG OID637905075 
ProductTetR family transcriptional regulator 
Protein accessionYP_510652 
Protein GI89055201 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.466457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.498996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAC CCAAACCCCG CACCCGCATC CAAGAGAAAA ACCGTGCCCG TGTGCTGGAA 
GCGGCGTTGG AGATCTTCTC GCTCCACGGA TTTCGCGGCG CGACGCTGGA CGCCATCGCC 
GCGGAGGCCG GGCTGTCAAA ACCCAACCTG CTCTACTATT TCGCGTCCAA GGAAGAGATC 
CACGTCACCC TGCTCGGCGG GCTGGTGGAT ACCTGGCTCG CCCCCTTGCG CGACATGCGC 
GCCGATGGAC ATCCGCAGGA CGAGTTGTTG GGATATGTGC GCCGCAAGTT GCAGATGAGC 
CGGGATTTCC CACGCGAATC GCGGCTTTTC GCGCAAGAGA TCGTTCAGGG CGCCCCCCGC 
ATGATCGACG GATTGTCGAC CGATCTGAAG GCGTTGGTGG ACGACAAGGC CGAGGTGATC 
CGCGACTGGA TGGATGCGGG TCACATTGCA CGCTCGGACC CGCACCACCT GATTTTCTCG 
ATCTGGTCGC TGACCCAGCA TTACGCCGAT TTCGACGTTC AGGTCCGCGC GGTCCTTGGC 
GCGGATCGTG ACCCCTTCGC GGAGGCGGAG GCGTTTCTGG ACGTGCTGTT CACCCGCTTG 
CTGCGCCCCT AG
 
Protein sequence
MTAPKPRTRI QEKNRARVLE AALEIFSLHG FRGATLDAIA AEAGLSKPNL LYYFASKEEI 
HVTLLGGLVD TWLAPLRDMR ADGHPQDELL GYVRRKLQMS RDFPRESRLF AQEIVQGAPR 
MIDGLSTDLK ALVDDKAEVI RDWMDAGHIA RSDPHHLIFS IWSLTQHYAD FDVQVRAVLG 
ADRDPFAEAE AFLDVLFTRL LRP