| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2112 |
|---|
| Symbol | rutR |
|---|
| ID | 6145284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2121926 |
|---|
| End bp | 2122564 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641616988 |
|---|
| Product | transcriptional regulator RutR |
|---|
| Protein accession | YP_001744163 |
|---|
| Protein GI | 170680576 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR03613] pyrimidine utilization regulatory protein R |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAG GCGCAGTGAA AATAACGGGT AAACGTTCGC GCGCAGTAAG CGCGAAGAAA
AAAGCGATTC TTAGCGCAGC ACTGGACACT TTTTCACAAT TCGGTTTTCA CGGCACAAGG
CTGGAGCAGA TCGCAGAGTT GGCAGGCGTT TCAAAAACCA ATCTGCTGTA TTACTTCCCG
TCAAAAGAGG CGCTGTATAT AGCCGTACTG CGGCAGATTC TCGATATCTG GCTGGCACCG
TTAAAAGCGT TTCGTGAAGA TTTCGCCCCG CTGGCGGCGA TCAAAGAGTA CATCCGTCTG
AAGCTGGAAG TCTCACGCGA TTATCCGCAG GCTTCACGTC TGTTTTGTAT GGAGATGCTG
GCAGGCGCGC CGTTGTTAAT GGATGAACTG ACGGGCGATT TGAAGGCATT AATTGATGAG
AAATCGGCGC TGATTGCCGG TTGGGTAAAA AGCGGCAAAC TCGCGCCGAT TGATCCGCAG
CATTTGATTT TTATGATTTG GGCTTCCACT CAACATTACG CCGATTTCGC CCCTCAGGTG
GAGGCGGTGA CAGGCGCGAC GTTGCGCGAT GAGGTATTTT TCAATCAAAC GGTTGAAAAC
GTGCAGCGGA TTATTATTGA GGGGATTCGA CCACGTTAA
|
|---|
| Protein sequence | MTQGAVKITG KRSRAVSAKK KAILSAALDT FSQFGFHGTR LEQIAELAGV SKTNLLYYFP
SKEALYIAVL RQILDIWLAP LKAFREDFAP LAAIKEYIRL KLEVSRDYPQ ASRLFCMEML
AGAPLLMDEL TGDLKALIDE KSALIAGWVK SGKLAPIDPQ HLIFMIWAST QHYADFAPQV
EAVTGATLRD EVFFNQTVEN VQRIIIEGIR PR
|
|---|
| |