Gene Rleg_3290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3290 
Symbol 
ID8014175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand- 
Start bp3291418 
End bp3292095 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content61% 
IMG OID644825849 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002977076 
Protein GI241205980 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.413178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0802991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATTTCA AGGGGAAACG ACAGCCTGTG ACCATACCGA GAGCAGCGAA AACCCTGAGG 
CGGACGCGAA TCCAGGAAGA GAAGGAAGAG CAGATCCTGG AAGCCGCGCT CGATGTGTTT 
TCGGCAAGCG GCTTTCGCGG TTCGACCATC GACCAGATTG CCGAAGTGGC CGGCATGTCG 
AAACCCAACC TGCTCTATTA TTTCCGCACC AAGGAAGCCA TGCACCGGGC GCTGATCGAC 
CGGGTGCTCT ACACCTGGCT GGAGCCGCTG CGGGCCTTCG ACGCCGAAGG CAATCCGGAG 
GCGGAAATCC GCAGCTACAT CCGCCGCAAG CTGGAGATGG CACGCGATTT TCCTCGCGAG 
AGCCGGCTTT TCGCCAACGA GGTGCTGCAG GGCGCGCCGC ATATCGAGGA CGAGCTGAAG 
GGACCGCTGA AGGAATTGGT CGACGAGAAG GCGGAGGTCA TCCGCACCTG GGCGAAGTCA 
GGCAAGATCG TCAAATGCGA TCCCTATCAC CTGATCTTCT CCATCTGGTC GACGACGCAG 
CATTACGCGG ATTTCGACGT CCAGGTGCGC GCGGTGCTGG GGCAGGAACA TTCGGGCGAA 
GGGCGTTTCG AGGATGCGGC GCGGTTTCTG GAACAGCTCT TCATCGGCGG GCTGCGACCG 
GATCCTCTCG GAGGGTGA
 
Protein sequence
MNFKGKRQPV TIPRAAKTLR RTRIQEEKEE QILEAALDVF SASGFRGSTI DQIAEVAGMS 
KPNLLYYFRT KEAMHRALID RVLYTWLEPL RAFDAEGNPE AEIRSYIRRK LEMARDFPRE 
SRLFANEVLQ GAPHIEDELK GPLKELVDEK AEVIRTWAKS GKIVKCDPYH LIFSIWSTTQ 
HYADFDVQVR AVLGQEHSGE GRFEDAARFL EQLFIGGLRP DPLGG