Gene MADE_02513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02513 
Symbol 
ID6778863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp2729026 
End bp2729670 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content47% 
IMG OID642755952 
Producttranscriptional regulator, TetR family protein 
Protein accessionYP_002126803 
Protein GI196157314 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGG TAAAAAGTGC CGACGCTGGT GTTGGCGCTA TGAACAGAAG AAAGATACTC 
CAAGCTGCTG AAAAGTGCTT CGCTCAGTTT GGTTTTAAAG GAACAGCGGT ACAAAAAATT 
GCTGACGAAG CCGGGCTCCC GAAAACTAAC GTACTGTACT ATTTCAAAAC CAAGCAAGAG 
CTTTACGTGG CGGTGCTAGA AGAAACCCTT TCACTGTGGA ATTCTCGCTT CGATAGAGCA 
ACGGTGGAGG ATGACCCCGC AGAAGTGTTG GCTAACTATA TCGCTGAGAA AATGGAAGTA 
TCGCGAACCA ACCCCCAGGC GTCTAAGATC TTTGCTATGG AAATTATCAA CGGTGCACAG 
AATTTAAGCG GCTACTTTGA TGAAGAGCAC GCGCTGTGGA TGAAGGGGCG TTTAGCAGTT 
ATCGATGCGT GGGTAGAGGC AGGTAAGCTT CCCCCTGTTG AAGGCGAGTA TTTGCTTTAC 
ACTATTTGGG CCAGTACCCA GCATTATGCC GATTTCTCTA CGCAAATCAC GCGGCTTCGC 
GGAAAGAAAA TGACAAAGAT AGACTTCGAG AACGCGACAA AGCAAGTGGT TAAGCTTGTA 
TTAGGCGGAT GTGGTTTGTC GGTACCTGAA AGCTTTGAGG TGTAA
 
Protein sequence
MMKVKSADAG VGAMNRRKIL QAAEKCFAQF GFKGTAVQKI ADEAGLPKTN VLYYFKTKQE 
LYVAVLEETL SLWNSRFDRA TVEDDPAEVL ANYIAEKMEV SRTNPQASKI FAMEIINGAQ 
NLSGYFDEEH ALWMKGRLAV IDAWVEAGKL PPVEGEYLLY TIWASTQHYA DFSTQITRLR 
GKKMTKIDFE NATKQVVKLV LGGCGLSVPE SFEV