Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1459 |
Symbol | |
ID | 5083920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1489940 |
End bp | 1490551 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640483015 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001167658 |
Protein GI | 146277499 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.540117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCC CGCGGCAGAC GCGCATTCAG CGGCGCAACT CCGAGGCGAT CTTCGAGGCC GCGCTGGAGG TCTTTTCGGC CCACGGGTTC CGCGGGGCCA CGCTCGACCA GATCGCCGAG GCCGCCGGCC TGTCGAAGCC GAACCTGCTC TATTACTTTC CGTCGAAGGA GGCGATCCAT GTGGCCCTGC TGTCGCGGCT GCTCGCGACC TGGCTTGATC CGCTGAAGGC GATGAACCCC GCGGGCGACC CGGTGGCCGA GATCCTCGGC TATGTCCGGC GCAAGCTGGA GCTGTCGCGC GACTTTCCGC GCGAGAGCCG GCTGTTTGCC AACGAGATCC TGCAGGGCGC GCCGCGAATG CGCGCCGTGA TCGAGACGGA CCTCAAGGAG CTGGTGGCGG ACAAGGCCGC CGTCCTGACC CGCTGGATGG ACGAGGGGCG GATCGCGCGC CTGCATCCGG TGCATCTGAT CTTCTCGATC TGGGCCATGA CGCAGCATTA CGCCGATTTC GAGGTGCAGG TGCGGGCGGT GCTGGGAGAG GGCGAGCCCG ACCCCTTCCC CGAGGCCGGG CTCTATCTCG AGACGCTGTT CAGGCGCCTT CTGGCCGTCT GA
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Protein sequence | MTSPRQTRIQ RRNSEAIFEA ALEVFSAHGF RGATLDQIAE AAGLSKPNLL YYFPSKEAIH VALLSRLLAT WLDPLKAMNP AGDPVAEILG YVRRKLELSR DFPRESRLFA NEILQGAPRM RAVIETDLKE LVADKAAVLT RWMDEGRIAR LHPVHLIFSI WAMTQHYADF EVQVRAVLGE GEPDPFPEAG LYLETLFRRL LAV
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