Gene Dd703_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0039 
Symbol 
ID8087460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand+ 
Start bp48304 
End bp48990 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content60% 
IMG OID644834105 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002985680 
Protein GI242237499 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.618128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTAC GGGATATGCA GGATGAGGGA ATAGTTGCCG CGCAAAGCGG GCGTTTGTTG 
CCGGAGAGCG CGGATGAAGG GGAAAAGGGA CGAATCCGGC AGGATAACGA AGCCATCATC 
CTGTTGGCGG CGGAGCGGGT ATTCGCCCGC TTCGGTTTTC GGGGCGCGAC CATGGCGCTG 
ATTGCCGAAG AAGCCGGGCT CCCCAAGGCC AACCTGCATT ATTATTTCGG CAATAAACAG 
ACGCTGTACC TCACGGTGCT CGACAGCATT CTGCACGATT GGCTGTCGCC GCTGGACGAC 
CTGCACCCGC AGGCCGATCC GAAAACCGCG ATCGAAGCCT ATGTGCGTCA GAAGATCCAT 
TTCAGCTTTG CCCGCCCGGA CGCTTCCCGC CTGTTCGCCA ACGAGATTCT GCAAGGGGCG 
CCGATGGTGC ATCACCTGTT GCAGACGGAG TTGCGGCGGC TGGTGGTGGA AAAGGCGGCG 
GTGCTGGATG GCTGGATCGC CGCCGATCGT CTGCAACCGC TGGATACCAC CCATTTCTTT 
TTCAGCGTTT GGTCGATGAC CCAGACCTAC GCGGATTTCG ACATTCAAAT CGCTGCGGTG 
CTGGGCGATG ATTCCCACAG CGACGCCGCC GAGGCGCGCG CCACCCGCCA TGTGCTGAAC 
AGTGTGTTTC GGATGTGCGG GCTGTAA
 
Protein sequence
MRVRDMQDEG IVAAQSGRLL PESADEGEKG RIRQDNEAII LLAAERVFAR FGFRGATMAL 
IAEEAGLPKA NLHYYFGNKQ TLYLTVLDSI LHDWLSPLDD LHPQADPKTA IEAYVRQKIH 
FSFARPDASR LFANEILQGA PMVHHLLQTE LRRLVVEKAA VLDGWIAADR LQPLDTTHFF 
FSVWSMTQTY ADFDIQIAAV LGDDSHSDAA EARATRHVLN SVFRMCGL