| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0639 |
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| Symbol | |
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| ID | 5868385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 726259 |
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| End bp | 726921 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641545727 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001666886 |
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| Protein GI | 167031655 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.307578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000146714 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCTAG AAGTCCCTGC GCATCGCCTC TCCGCCTCGG GCAAGCCCGC AGGCCGCATC
CGCCAGAAGA ACGAACAGGC CATTATCCAG GCCGCCGAAG ACGAATTCGC CCGCCATGGT
TTCAAGGGCA CCAGCATGAA CACCATCGCG CTCAAGGCAG GGTTGCCCAA GGCCAACCTG
CACTACTACT TCACCAACAA GCTGGGCCTG TACATTGCCG TGCTCAGCAA CATCATCGAG
TTGTGGGACA GCACGTTCAA CGCCTTGAGC GTCGAGGATG ACCCCGGCGA AGCCCTGAGC
CAGTACATCC GCACCAAGAT GGAGTTCTCT CGGCGCAACC CGCAAGCCTC GCGGATTTTC
GCCATGGAAG TGATCAGCGG TGGCACCTGC CTGACCGAAT ACTTCAGTGC CGACTACCGC
GAATGGTTCC GCGGCCGGGC TGCAGTGTTC CAGGCCTGGA TCGAAGCCGG CAAGATGGAC
CCTGTCGACC CGGTGCACCT GATCTTCCTG CTCTGGGGCA GCACCCAGCA TTACGCCGAC
TTCGCCACCC AGATCTGCCA GGTGACCGGC CGCAGCCGCC TGACCAAGCA GGACATGGAA
GACGCGAGCA ACAACCTTAT CCACATCATT CTGAAGGGCT GCGGCATCAA GCCGGCTGCC
TGA
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| Protein sequence | MTLEVPAHRL SASGKPAGRI RQKNEQAIIQ AAEDEFARHG FKGTSMNTIA LKAGLPKANL
HYYFTNKLGL YIAVLSNIIE LWDSTFNALS VEDDPGEALS QYIRTKMEFS RRNPQASRIF
AMEVISGGTC LTEYFSADYR EWFRGRAAVF QAWIEAGKMD PVDPVHLIFL LWGSTQHYAD
FATQICQVTG RSRLTKQDME DASNNLIHII LKGCGIKPAA
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