Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_02090 |
Symbol | |
ID | 4383567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 190557 |
End bp | 191222 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639322724 |
Product | TetR family transcriptional regulator |
Protein accession | YP_788325 |
Protein GI | 116053888 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.395705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGA CAGTGCCCGC CCACGACCCG GCCGCCCGCG ACAAGCCGGC CGGGCGCATC CGCCAGAAGA ACGAGGAGGC GATCCTCGCC GCGGCCGAGG AGGAGTTCGC CCGCCACGGC TTCAAGGGCA CCAGCATGAA CACCATCGCG CAGAACGTTG GCCTGCCCAA GGCCAACCTG CACTACTACT TCGGCAACAA GCTGGGCCTC TACACGGCGG TGCTGAGCAA CATCCTCGAA CTCTGGGACA GTACCTTCAA CACCCTCTGC GTCGACGACG ATCCGGCCGA GGCGCTGGCC CGCTACATCC GCGCCAAGAT GGAGTTCTCC CGCCGCTACC CGCTGGCCTC GCGGATCTTC GCCATGGAGA TCATCAGCGG CGGCGAGTGC CTCACCGCGC ATTTCAACCA GGACTACCGC AGCTGGTTCC GCGGCCGCGC CGCGGTATTC GAGGCCTGGA TCGCCGCCGG CCGGATGGAC CCGGTGGATC CCGTGCACCT GATCTTCCTG CTCTGGGGCA GCACCCAGCA CTACGCCGAC TTCGCCAGCC AGATCGGCTT GGTCACCGGC CGCAAGCGCA TGTCCAGGCA GGACTTCGCC GCCGCCGCCG ACAACCTGGT GCGGATCATC CTCAAGGGCT GCGGACTGAC CCCGCCGGCG GCCTGA
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Protein sequence | MTLTVPAHDP AARDKPAGRI RQKNEEAILA AAEEEFARHG FKGTSMNTIA QNVGLPKANL HYYFGNKLGL YTAVLSNILE LWDSTFNTLC VDDDPAEALA RYIRAKMEFS RRYPLASRIF AMEIISGGEC LTAHFNQDYR SWFRGRAAVF EAWIAAGRMD PVDPVHLIFL LWGSTQHYAD FASQIGLVTG RKRMSRQDFA AAADNLVRII LKGCGLTPPA A
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