| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1499 |
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| Symbol | |
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| ID | 4077055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1605177 |
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| End bp | 1605788 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638006812 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_613494 |
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| Protein GI | 99081340 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0951967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCTCAG ACCGCAGCCC CACGAGAATT CAAAAACGAA ACCGTGCCAA TATCTTAGAG
GCCGCTCTGG AAGTGTTTTC CCAACATGGG TTTCGTGGCT CCACGGTAGA TCAGGTGGCC
ACCGCCGCCG GTCTTTCAAA GCCCAATCTG CTCTATTATT ACCCCTCAAA AGAAGCGATC
TTTACAGAGC TTTTGTCAAA GCTTCTTGAC GATTGGCTGG CGCCCTTGCA TGAAATCGAC
CCGGATGGCG AACCGATGGA GGAAATCCTC GGCTATGTGC AGCGCAAATT GCTGATGAGT
CAGAGCATGC CGCGCGAAAG CCGTCTCTTT GCCAATGAGA TCGTGCAAGG CGCACCGCGC
ATGATCGACA CGCTTTCGAC CGACCTGCGT GCGCTGGTGG ACAAGACCGA ACTGATTTTC
CAGAACTGGA TGGACGCCGG CAAGATCGCC CCGGTTCACC CGCGCCATCT GCTGTTTTCA
ATCTGGTCGC TCACGCAACA CTACGCCGAT TTCGAGGTCC AGGTGCAGGC GCTGATGACC
CCCGAAGATC CGTTTGAGGC CGCACCGGAG TTTCTCGACA CGCTCTATCG CAGGATGTTG
ACCCCGCCCT GA
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| Protein sequence | MASDRSPTRI QKRNRANILE AALEVFSQHG FRGSTVDQVA TAAGLSKPNL LYYYPSKEAI
FTELLSKLLD DWLAPLHEID PDGEPMEEIL GYVQRKLLMS QSMPRESRLF ANEIVQGAPR
MIDTLSTDLR ALVDKTELIF QNWMDAGKIA PVHPRHLLFS IWSLTQHYAD FEVQVQALMT
PEDPFEAAPE FLDTLYRRML TPP
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