Gene Reut_B3988 details

Gene Information

• Locus tag: Reut_B3988
• ID: 3613669
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia eutropha JMP134
• Kingdom: Bacteria
• Replicon accession: NC_007348
• Strand: +
• Start bp: 626392
• End bp: 627093
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637693421
• Product: regulatory protein, TetR
• Protein accession: YP_298188
• Protein GI: 73537821
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.100564
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGGCC CCGCGGTTGC CGCGGCGCGC CGCCTGCCGC TGGCGCGCGA CGCCAGCGTC 
GGGCGCATCC GGCAGGAGAA CGAGGCCATG ATCCTGCGCG CGGCCGAGCA CGTCTTTGCA 
CGCGCCGGCT TCGCAGGCGC CACCATGGCC GAGATCGCGG TGCGCGCCGG GGTGCCCAAA 
TCCAACCTCC ACTACTACTT CAGAACGAAG CAGGCGCTGT ACCGTGCGGT GCTCGCGCAT 
ACGCTGCAGC TCTGGCTGTC AGAGACCGAG GCAATCCGCG CCGAGCTGCC TCCGGAGGTC 
GCGCTCGAAC AGTACATCCG GGCCAAGATG CGCCTGTCGG CGAGCCATCC TGATGCCTCG 
CGCGTATTCG CCAACGAACT CCTGCACGGC GCACCGGAGA TCGGCGAAGT CCTGCGCCAT 
GCGCTGCGCG AACTGGTCGA GCACAAGTCG GATGTGATCC GCCACTGGAT CGCCACGGGC 
CAGATGGCGA GCGTGGATCC GCAACACCTG TTCTTCACGA TCTGGGCGGC GACCCAGACC 
TACGCCGATT TCGAATCGCA GATCTGCGCT GTGCTCGGTG TGAGCCGACT GGGCCGGCGT 
GATTTCGAGC TGGCCACCGA ACACCTGGTG GCGCTGCTGC TGCGAGGCTG CGGACTGCTG 
CCCGTGAGCG CACAGTTGGC GCAGGACATA ACAACACCGT AG 

 

Protein sequence

MDGPAVAAAR RLPLARDASV GRIRQENEAM ILRAAEHVFA RAGFAGATMA EIAVRAGVPK 
SNLHYYFRTK QALYRAVLAH TLQLWLSETE AIRAELPPEV ALEQYIRAKM RLSASHPDAS 
RVFANELLHG APEIGEVLRH ALRELVEHKS DVIRHWIATG QMASVDPQHL FFTIWAATQT 
YADFESQICA VLGVSRLGRR DFELATEHLV ALLLRGCGLL PVSAQLAQDI TTP